Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS4O43181 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.19■□□□□ 0.66
NDUFS4O43181 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS4O43181 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.19■□□□□ 0.66
NDUFS4O43181 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS4O43181 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS4O43181 PTBP1P-201ENST00000554374 1601 ntBASIC19.19■□□□□ 0.66
NDUFS4O43181 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS4O43181 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS4O43181 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.19■□□□□ 0.66
NDUFS4O43181 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.19■□□□□ 0.66
NDUFS4O43181 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.19■□□□□ 0.66
NDUFS4O43181 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS4O43181 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS4O43181 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS4O43181 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.19■□□□□ 0.66
NDUFS4O43181 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS4O43181 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFS4O43181 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
NDUFS4O43181 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.18■□□□□ 0.66
NDUFS4O43181 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS4O43181 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS4O43181 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS4O43181 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.18■□□□□ 0.66
NDUFS4O43181 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS4O43181 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS4O43181 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.18■□□□□ 0.66
NDUFS4O43181 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS4O43181 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS4O43181 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.18■□□□□ 0.66
NDUFS4O43181 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS4O43181 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.18■□□□□ 0.66
NDUFS4O43181 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
NDUFS4O43181 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS4O43181 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NDUFS4O43181 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS4O43181 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS4O43181 AL391422.3-201ENST00000603791 2761 ntBASIC19.18■□□□□ 0.66
NDUFS4O43181 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS4O43181 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
NDUFS4O43181 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFS4O43181 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS4O43181 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS4O43181 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS4O43181 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.17■□□□□ 0.66
NDUFS4O43181 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS4O43181 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS4O43181 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS4O43181 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS4O43181 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS4O43181 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.17■□□□□ 0.66
NDUFS4O43181 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS4O43181 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFS4O43181 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.17■□□□□ 0.66
NDUFS4O43181 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
NDUFS4O43181 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.17■□□□□ 0.66
NDUFS4O43181 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS4O43181 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS4O43181 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
NDUFS4O43181 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.16■□□□□ 0.66
NDUFS4O43181 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS4O43181 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS4O43181 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS4O43181 AC092368.3-202ENST00000574180 1591 ntBASIC19.16■□□□□ 0.66
NDUFS4O43181 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NDUFS4O43181 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS4O43181 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.16■□□□□ 0.66
NDUFS4O43181 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS4O43181 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.16■□□□□ 0.66
NDUFS4O43181 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS4O43181 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.16■□□□□ 0.66
NDUFS4O43181 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.16■□□□□ 0.66
NDUFS4O43181 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS4O43181 HLA-B-256ENST00000639848 1089 ntBASIC19.16■□□□□ 0.66
NDUFS4O43181 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.16■□□□□ 0.66
NDUFS4O43181 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NDUFS4O43181 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS4O43181 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.16■□□□□ 0.66
NDUFS4O43181 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.16■□□□□ 0.66
NDUFS4O43181 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.16■□□□□ 0.66
NDUFS4O43181 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NDUFS4O43181 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS4O43181 KRT8P20-201ENST00000423953 1409 ntBASIC19.16■□□□□ 0.66
NDUFS4O43181 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFS4O43181 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.16■□□□□ 0.66
NDUFS4O43181 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.16■□□□□ 0.66
NDUFS4O43181 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDUFS4O43181 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NDUFS4O43181 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.15■□□□□ 0.66
NDUFS4O43181 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDUFS4O43181 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NDUFS4O43181 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDUFS4O43181 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NDUFS4O43181 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDUFS4O43181 HLA-G-202ENST00000376815 851 ntBASIC19.15■□□□□ 0.66
NDUFS4O43181 HLA-G-203ENST00000376818 1127 ntBASIC19.15■□□□□ 0.66
NDUFS4O43181 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
NDUFS4O43181 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.15■□□□□ 0.66
NDUFS4O43181 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.15■□□□□ 0.66
NDUFS4O43181 AC023632.3-201ENST00000521633 145 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms