Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD9O15198 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD9O15198 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMAD9O15198 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD9O15198 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
SMAD9O15198 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD9O15198 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD9O15198 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD9O15198 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD9O15198 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD9O15198 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.13■□□□□ 0.49
SMAD9O15198 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.13■□□□□ 0.49
SMAD9O15198 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.13■□□□□ 0.49
SMAD9O15198 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.13■□□□□ 0.49
SMAD9O15198 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD9O15198 MYC-209ENST00000641252 345 ntBASIC18.13■□□□□ 0.49
SMAD9O15198 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD9O15198 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD9O15198 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD9O15198 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD9O15198 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD9O15198 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD9O15198 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
SMAD9O15198 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD9O15198 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD9O15198 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.13■□□□□ 0.49
SMAD9O15198 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD9O15198 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD9O15198 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.13■□□□□ 0.49
SMAD9O15198 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMAD9O15198 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SMAD9O15198 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.12■□□□□ 0.49
SMAD9O15198 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.12■□□□□ 0.49
SMAD9O15198 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMAD9O15198 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMAD9O15198 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMAD9O15198 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMAD9O15198 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.12■□□□□ 0.49
SMAD9O15198 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMAD9O15198 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMAD9O15198 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMAD9O15198 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SMAD9O15198 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SMAD9O15198 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMAD9O15198 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMAD9O15198 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMAD9O15198 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMAD9O15198 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMAD9O15198 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMAD9O15198 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMAD9O15198 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
SMAD9O15198 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.11■□□□□ 0.49
SMAD9O15198 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SMAD9O15198 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SMAD9O15198 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.11■□□□□ 0.49
SMAD9O15198 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMAD9O15198 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.11■□□□□ 0.49
SMAD9O15198 AC097658.1-201ENST00000475555 843 ntBASIC18.11■□□□□ 0.49
SMAD9O15198 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.11■□□□□ 0.49
SMAD9O15198 C2orf69P4-201ENST00000565394 541 ntBASIC18.11■□□□□ 0.49
SMAD9O15198 AC083880.1-201ENST00000608266 535 ntBASIC18.11■□□□□ 0.49
SMAD9O15198 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMAD9O15198 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.11■□□□□ 0.49
SMAD9O15198 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMAD9O15198 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.11■□□□□ 0.49
SMAD9O15198 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMAD9O15198 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMAD9O15198 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.11■□□□□ 0.49
SMAD9O15198 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SMAD9O15198 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMAD9O15198 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMAD9O15198 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMAD9O15198 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMAD9O15198 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SMAD9O15198 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD9O15198 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SMAD9O15198 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.1■□□□□ 0.49
SMAD9O15198 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.1■□□□□ 0.49
SMAD9O15198 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.1■□□□□ 0.49
SMAD9O15198 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.1■□□□□ 0.49
SMAD9O15198 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.1■□□□□ 0.49
SMAD9O15198 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD9O15198 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD9O15198 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SMAD9O15198 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.1■□□□□ 0.49
SMAD9O15198 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.1■□□□□ 0.49
SMAD9O15198 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD9O15198 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.1■□□□□ 0.49
SMAD9O15198 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD9O15198 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SMAD9O15198 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD9O15198 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
SMAD9O15198 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMAD9O15198 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMAD9O15198 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SMAD9O15198 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMAD9O15198 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.09■□□□□ 0.49
SMAD9O15198 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.09■□□□□ 0.49
SMAD9O15198 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMAD9O15198 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms