Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
SOX1O00570 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.5■■□□□ 1.03
SOX1O00570 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.5■■□□□ 1.03
SOX1O00570 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SOX1O00570 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.5■■□□□ 1.03
SOX1O00570 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SOX1O00570 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.49■■□□□ 1.03
SOX1O00570 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SOX1O00570 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.49■■□□□ 1.03
SOX1O00570 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SOX1O00570 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SOX1O00570 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SOX1O00570 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SOX1O00570 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SOX1O00570 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.49■■□□□ 1.03
SOX1O00570 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.49■■□□□ 1.03
SOX1O00570 AC023632.3-201ENST00000521633 145 ntBASIC21.49■■□□□ 1.03
SOX1O00570 MIR3652-201ENST00000579335 131 ntBASIC21.49■■□□□ 1.03
SOX1O00570 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SOX1O00570 AL445675.2-201ENST00000620291 557 ntBASIC21.49■■□□□ 1.03
SOX1O00570 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
SOX1O00570 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SOX1O00570 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.49■■□□□ 1.03
SOX1O00570 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.49■■□□□ 1.03
SOX1O00570 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.48■■□□□ 1.03
SOX1O00570 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SOX1O00570 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SOX1O00570 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.48■■□□□ 1.03
SOX1O00570 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.48■■□□□ 1.03
SOX1O00570 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SOX1O00570 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SOX1O00570 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SOX1O00570 AC008622.2-201ENST00000617006 1229 ntBASIC21.48■■□□□ 1.03
SOX1O00570 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SOX1O00570 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SOX1O00570 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SOX1O00570 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SOX1O00570 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.47■■□□□ 1.03
SOX1O00570 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SOX1O00570 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SOX1O00570 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
SOX1O00570 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.47■■□□□ 1.03
SOX1O00570 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SOX1O00570 AC007663.1-201ENST00000438948 1240 ntBASIC21.47■■□□□ 1.03
SOX1O00570 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.47■■□□□ 1.03
SOX1O00570 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SOX1O00570 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.47■■□□□ 1.03
SOX1O00570 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SOX1O00570 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.47■■□□□ 1.03
SOX1O00570 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SOX1O00570 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.47■■□□□ 1.03
SOX1O00570 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SOX1O00570 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SOX1O00570 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SOX1O00570 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.47■■□□□ 1.03
SOX1O00570 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SOX1O00570 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
SOX1O00570 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SOX1O00570 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SOX1O00570 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SOX1O00570 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.46■■□□□ 1.03
SOX1O00570 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SOX1O00570 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.46■■□□□ 1.03
SOX1O00570 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SOX1O00570 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
SOX1O00570 AC083849.1-201ENST00000615227 514 ntBASIC21.46■■□□□ 1.03
SOX1O00570 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.46■■□□□ 1.03
SOX1O00570 AL031432.5-201ENST00000641059 760 ntBASIC21.46■■□□□ 1.03
SOX1O00570 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SOX1O00570 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SOX1O00570 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.46■■□□□ 1.03
SOX1O00570 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SOX1O00570 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SOX1O00570 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SOX1O00570 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SOX1O00570 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SOX1O00570 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SOX1O00570 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SOX1O00570 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.45■■□□□ 1.02
SOX1O00570 AL671883.3-201ENST00000603274 991 ntBASIC21.45■■□□□ 1.02
SOX1O00570 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SOX1O00570 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
SOX1O00570 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
SOX1O00570 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.44■■□□□ 1.02
SOX1O00570 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SOX1O00570 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SOX1O00570 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SOX1O00570 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SOX1O00570 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SOX1O00570 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.44■■□□□ 1.02
SOX1O00570 AC010542.4-201ENST00000563151 1910 ntBASIC21.44■■□□□ 1.02
SOX1O00570 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SOX1O00570 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SOX1O00570 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SOX1O00570 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SOX1O00570 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.44■■□□□ 1.02
SOX1O00570 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SOX1O00570 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.43■■□□□ 1.02
SOX1O00570 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SOX1O00570 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms