Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP3B1O00203 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP3B1O00203 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.23■□□□□ 0.83
AP3B1O00203 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP3B1O00203 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.23■□□□□ 0.83
AP3B1O00203 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.23■□□□□ 0.83
AP3B1O00203 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AP3B1O00203 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
AP3B1O00203 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP3B1O00203 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.23■□□□□ 0.83
AP3B1O00203 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.23■□□□□ 0.83
AP3B1O00203 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AP3B1O00203 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.23■□□□□ 0.83
AP3B1O00203 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.23■□□□□ 0.83
AP3B1O00203 AC010980.2-201ENST00000587099 1412 ntBASIC20.23■□□□□ 0.83
AP3B1O00203 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.23■□□□□ 0.83
AP3B1O00203 AC022517.1-201ENST00000592429 346 ntBASIC20.23■□□□□ 0.83
AP3B1O00203 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.23■□□□□ 0.83
AP3B1O00203 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
AP3B1O00203 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP3B1O00203 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AP3B1O00203 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.23■□□□□ 0.83
AP3B1O00203 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.23■□□□□ 0.83
AP3B1O00203 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP3B1O00203 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
AP3B1O00203 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP3B1O00203 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.23■□□□□ 0.83
AP3B1O00203 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
AP3B1O00203 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP3B1O00203 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP3B1O00203 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP3B1O00203 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP3B1O00203 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP3B1O00203 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
AP3B1O00203 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP3B1O00203 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
AP3B1O00203 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP3B1O00203 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP3B1O00203 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
AP3B1O00203 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.22■□□□□ 0.83
AP3B1O00203 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP3B1O00203 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP3B1O00203 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP3B1O00203 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.22■□□□□ 0.83
AP3B1O00203 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP3B1O00203 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP3B1O00203 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.22■□□□□ 0.83
AP3B1O00203 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP3B1O00203 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
AP3B1O00203 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP3B1O00203 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.21■□□□□ 0.83
AP3B1O00203 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
AP3B1O00203 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP3B1O00203 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AP3B1O00203 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.21■□□□□ 0.83
AP3B1O00203 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
AP3B1O00203 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
AP3B1O00203 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AP3B1O00203 AC023632.3-201ENST00000521633 145 ntBASIC20.21■□□□□ 0.83
AP3B1O00203 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.21■□□□□ 0.83
AP3B1O00203 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.21■□□□□ 0.83
AP3B1O00203 AC005181.1-201ENST00000604782 1256 ntBASIC20.21■□□□□ 0.83
AP3B1O00203 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP3B1O00203 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP3B1O00203 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AP3B1O00203 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP3B1O00203 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AP3B1O00203 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
AP3B1O00203 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
AP3B1O00203 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
AP3B1O00203 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3B1O00203 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
AP3B1O00203 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
AP3B1O00203 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.2■□□□□ 0.82
AP3B1O00203 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
AP3B1O00203 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3B1O00203 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3B1O00203 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
AP3B1O00203 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.2■□□□□ 0.82
AP3B1O00203 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.2■□□□□ 0.82
AP3B1O00203 AC133552.2-202ENST00000575694 574 ntBASIC20.2■□□□□ 0.82
AP3B1O00203 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
AP3B1O00203 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.2■□□□□ 0.82
AP3B1O00203 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.2■□□□□ 0.82
AP3B1O00203 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
AP3B1O00203 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3B1O00203 PCDHAC2-203ENST00000615316 3011 ntBASIC20.2■□□□□ 0.82
AP3B1O00203 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3B1O00203 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3B1O00203 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3B1O00203 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.2■□□□□ 0.82
AP3B1O00203 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3B1O00203 AFG3L1P-217ENST00000557444 2447 ntBASIC20.19■□□□□ 0.82
AP3B1O00203 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.19■□□□□ 0.82
AP3B1O00203 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3B1O00203 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.19■□□□□ 0.82
AP3B1O00203 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
AP3B1O00203 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3B1O00203 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3B1O00203 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms