Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00473A8K010 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00473A8K010 PTBP1P-201ENST00000554374 1601 ntBASIC16.3■□□□□ 0.2
LINC00473A8K010 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00473A8K010 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LINC00473A8K010 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00473A8K010 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00473A8K010 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
LINC00473A8K010 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00473A8K010 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LINC00473A8K010 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LINC00473A8K010 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.3■□□□□ 0.2
LINC00473A8K010 CNN2P6-201ENST00000439038 900 ntBASIC16.3■□□□□ 0.2
LINC00473A8K010 RARRES2P4-201ENST00000514074 484 ntBASIC16.3■□□□□ 0.2
LINC00473A8K010 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.3■□□□□ 0.2
LINC00473A8K010 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC00473A8K010 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00473A8K010 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00473A8K010 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.3■□□□□ 0.2
LINC00473A8K010 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00473A8K010 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00473A8K010 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00473A8K010 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00473A8K010 AC068338.2-201ENST00000563278 1430 ntBASIC16.29■□□□□ 0.2
LINC00473A8K010 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
LINC00473A8K010 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LINC00473A8K010 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00473A8K010 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00473A8K010 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00473A8K010 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00473A8K010 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC00473A8K010 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00473A8K010 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00473A8K010 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.29■□□□□ 0.2
LINC00473A8K010 MCRIP2P1-201ENST00000394346 511 ntBASIC16.29■□□□□ 0.2
LINC00473A8K010 AC016769.1-201ENST00000409132 1010 ntBASIC16.29■□□□□ 0.2
LINC00473A8K010 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LINC00473A8K010 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.29■□□□□ 0.2
LINC00473A8K010 DUX4L16-201ENST00000555130 1264 ntBASIC16.29■□□□□ 0.2
LINC00473A8K010 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.29■□□□□ 0.2
LINC00473A8K010 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC00473A8K010 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LINC00473A8K010 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00473A8K010 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00473A8K010 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC00473A8K010 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC00473A8K010 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
LINC00473A8K010 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC00473A8K010 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00473A8K010 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC00473A8K010 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00473A8K010 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00473A8K010 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.28■□□□□ 0.2
LINC00473A8K010 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LINC00473A8K010 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00473A8K010 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LINC00473A8K010 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00473A8K010 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00473A8K010 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
LINC00473A8K010 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.28■□□□□ 0.2
LINC00473A8K010 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.28■□□□□ 0.2
LINC00473A8K010 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.28■□□□□ 0.2
LINC00473A8K010 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00473A8K010 AC100791.3-201ENST00000617619 330 ntBASIC16.28■□□□□ 0.2
LINC00473A8K010 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.28■□□□□ 0.2
LINC00473A8K010 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00473A8K010 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LINC00473A8K010 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00473A8K010 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00473A8K010 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LINC00473A8K010 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00473A8K010 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00473A8K010 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00473A8K010 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00473A8K010 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00473A8K010 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
LINC00473A8K010 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00473A8K010 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00473A8K010 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00473A8K010 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00473A8K010 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LINC00473A8K010 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00473A8K010 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.27■□□□□ 0.2
LINC00473A8K010 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.27■□□□□ 0.2
LINC00473A8K010 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00473A8K010 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC00473A8K010 AC011767.1-201ENST00000617410 1153 ntBASIC16.27■□□□□ 0.2
LINC00473A8K010 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LINC00473A8K010 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00473A8K010 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00473A8K010 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.27■□□□□ 0.2
LINC00473A8K010 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.27■□□□□ 0.19
LINC00473A8K010 AC087289.5-201ENST00000586076 3175 ntBASIC16.27■□□□□ 0.19
LINC00473A8K010 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00473A8K010 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00473A8K010 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00473A8K010 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00473A8K010 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LINC00473A8K010 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
LINC00473A8K010 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms