Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CGB1A6NKQ9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CGB1A6NKQ9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
CGB1A6NKQ9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CGB1A6NKQ9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.01■□□□□ 0.15
CGB1A6NKQ9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 AC016769.1-201ENST00000409132 1010 ntBASIC16.01■□□□□ 0.15
CGB1A6NKQ9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 RARRES2P4-201ENST00000514074 484 ntBASIC16.01■□□□□ 0.15
CGB1A6NKQ9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.01■□□□□ 0.15
CGB1A6NKQ9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CGB1A6NKQ9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CGB1A6NKQ9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CGB1A6NKQ9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CGB1A6NKQ9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CGB1A6NKQ9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CGB1A6NKQ9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16■□□□□ 0.15
CGB1A6NKQ9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CGB1A6NKQ9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CGB1A6NKQ9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16■□□□□ 0.15
CGB1A6NKQ9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CGB1A6NKQ9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CGB1A6NKQ9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CGB1A6NKQ9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16■□□□□ 0.15
CGB1A6NKQ9 PGM5P4-201ENST00000421970 445 ntBASIC16■□□□□ 0.15
CGB1A6NKQ9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16■□□□□ 0.15
CGB1A6NKQ9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16■□□□□ 0.15
CGB1A6NKQ9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16■□□□□ 0.15
CGB1A6NKQ9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
CGB1A6NKQ9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16■□□□□ 0.15
CGB1A6NKQ9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16■□□□□ 0.15
CGB1A6NKQ9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CGB1A6NKQ9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16■□□□□ 0.15
CGB1A6NKQ9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16■□□□□ 0.15
CGB1A6NKQ9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CGB1A6NKQ9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CGB1A6NKQ9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CGB1A6NKQ9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CGB1A6NKQ9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CGB1A6NKQ9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CGB1A6NKQ9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CGB1A6NKQ9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.99■□□□□ 0.15
CGB1A6NKQ9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CGB1A6NKQ9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.99■□□□□ 0.15
CGB1A6NKQ9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CGB1A6NKQ9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CGB1A6NKQ9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CGB1A6NKQ9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CGB1A6NKQ9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CGB1A6NKQ9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CGB1A6NKQ9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CGB1A6NKQ9 AL162430.1-201ENST00000480705 870 ntBASIC15.99■□□□□ 0.15
CGB1A6NKQ9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.99■□□□□ 0.15
CGB1A6NKQ9 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.99■□□□□ 0.15
CGB1A6NKQ9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CGB1A6NKQ9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CGB1A6NKQ9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CGB1A6NKQ9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CGB1A6NKQ9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CGB1A6NKQ9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CGB1A6NKQ9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CGB1A6NKQ9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CGB1A6NKQ9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CGB1A6NKQ9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CGB1A6NKQ9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CGB1A6NKQ9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CGB1A6NKQ9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CGB1A6NKQ9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.98■□□□□ 0.15
CGB1A6NKQ9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CGB1A6NKQ9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CGB1A6NKQ9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CGB1A6NKQ9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CGB1A6NKQ9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CGB1A6NKQ9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 532.4 ms