Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 DUX4L19-201ENST00000557448 1267 ntBASIC14.23□□□□□ -0.13
LINC01549A6NIU2 SMUG1P1-201ENST00000590640 811 ntBASIC14.23□□□□□ -0.13
LINC01549A6NIU2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 NEFHP1-201ENST00000412845 2629 ntBASIC14.22□□□□□ -0.13
LINC01549A6NIU2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01549A6NIU2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01549A6NIU2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01549A6NIU2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC01549A6NIU2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01549A6NIU2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01549A6NIU2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01549A6NIU2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01549A6NIU2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC01549A6NIU2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC01549A6NIU2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01549A6NIU2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01549A6NIU2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01549A6NIU2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01549A6NIU2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01549A6NIU2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC01549A6NIU2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01549A6NIU2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01549A6NIU2 SRD5A1P1-201ENST00000442297 786 ntBASIC14.21□□□□□ -0.13
LINC01549A6NIU2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC01549A6NIU2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC01549A6NIU2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
LINC01549A6NIU2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
LINC01549A6NIU2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
LINC01549A6NIU2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.21□□□□□ -0.14
LINC01549A6NIU2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LINC01549A6NIU2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.21□□□□□ -0.14
LINC01549A6NIU2 SYT6-210ENST00000641643 1587 ntBASIC14.21□□□□□ -0.14
LINC01549A6NIU2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.21□□□□□ -0.14
LINC01549A6NIU2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LINC01549A6NIU2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.21□□□□□ -0.14
LINC01549A6NIU2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 AL138781.2-201ENST00000617896 1843 ntBASIC14.2□□□□□ -0.14
LINC01549A6NIU2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 TREX1-205ENST00000625293 1783 ntBASIC14.2□□□□□ -0.14
LINC01549A6NIU2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01549A6NIU2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms