Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.08■□□□□ 0.32
TMEM235A6NFC5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TMEM235A6NFC5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TMEM235A6NFC5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM235A6NFC5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM235A6NFC5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM235A6NFC5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.07■□□□□ 0.32
TMEM235A6NFC5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM235A6NFC5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM235A6NFC5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TMEM235A6NFC5 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM235A6NFC5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TMEM235A6NFC5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM235A6NFC5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM235A6NFC5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM235A6NFC5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM235A6NFC5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TMEM235A6NFC5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TMEM235A6NFC5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 EDA-201ENST00000338901 1233 ntBASIC17.06■□□□□ 0.32
TMEM235A6NFC5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 AC010141.2-201ENST00000452426 721 ntBASIC17.06■□□□□ 0.32
TMEM235A6NFC5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 AL354811.1-201ENST00000610286 706 ntBASIC17.06■□□□□ 0.32
TMEM235A6NFC5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TMEM235A6NFC5 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 AC096631.2-201ENST00000436136 790 ntBASIC17.05■□□□□ 0.32
TMEM235A6NFC5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 AF213884.3-201ENST00000563833 479 ntBASIC17.05■□□□□ 0.32
TMEM235A6NFC5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM235A6NFC5 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM235A6NFC5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TMEM235A6NFC5 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM235A6NFC5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM235A6NFC5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM235A6NFC5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM235A6NFC5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.04■□□□□ 0.32
TMEM235A6NFC5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM235A6NFC5 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM235A6NFC5 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM235A6NFC5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM235A6NFC5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM235A6NFC5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM235A6NFC5 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TMEM235A6NFC5 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM235A6NFC5 MIR939-201ENST00000401314 82 ntBASIC17.04■□□□□ 0.32
TMEM235A6NFC5 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM235A6NFC5 AC106739.1-201ENST00000617035 715 ntBASIC17.04■□□□□ 0.32
TMEM235A6NFC5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TMEM235A6NFC5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM235A6NFC5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TMEM235A6NFC5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM235A6NFC5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms