Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.06■□□□□ 0
TRAV25A0A0B4J276 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 SOX15-203ENST00000570788 1093 ntBASIC15.06■□□□□ 0
TRAV25A0A0B4J276 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.06■□□□□ 0
TRAV25A0A0B4J276 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV25A0A0B4J276 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV25A0A0B4J276 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV25A0A0B4J276 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.05■□□□□ 0
TRAV25A0A0B4J276 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV25A0A0B4J276 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV25A0A0B4J276 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV25A0A0B4J276 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV25A0A0B4J276 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV25A0A0B4J276 ESRRAP1-201ENST00000400596 1257 ntBASIC15.05■□□□□ -0
TRAV25A0A0B4J276 KRT17P3-201ENST00000420566 1262 ntBASIC15.05■□□□□ -0
TRAV25A0A0B4J276 POU5F1P3-201ENST00000428824 1078 ntBASIC15.05■□□□□ -0
TRAV25A0A0B4J276 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.05■□□□□ -0
TRAV25A0A0B4J276 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
TRAV25A0A0B4J276 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.05■□□□□ -0
TRAV25A0A0B4J276 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TRAV25A0A0B4J276 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.05■□□□□ -0
TRAV25A0A0B4J276 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.05■□□□□ -0
TRAV25A0A0B4J276 AC008687.6-201ENST00000596318 630 ntBASIC15.05■□□□□ -0
TRAV25A0A0B4J276 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRAV25A0A0B4J276 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV25A0A0B4J276 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC15.05■□□□□ -0
TRAV25A0A0B4J276 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.05■□□□□ -0
TRAV25A0A0B4J276 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.05■□□□□ -0
TRAV25A0A0B4J276 GABARAPL3-202ENST00000624044 1851 ntBASIC15.05■□□□□ -0
TRAV25A0A0B4J276 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRAV25A0A0B4J276 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV25A0A0B4J276 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV25A0A0B4J276 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV25A0A0B4J276 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV25A0A0B4J276 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.05■□□□□ -0
TRAV25A0A0B4J276 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 AC120498.8-201ENST00000614275 531 ntBASIC15.04■□□□□ -0
TRAV25A0A0B4J276 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV25A0A0B4J276 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.03■□□□□ -0
TRAV25A0A0B4J276 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms