Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 IGLVIV-66-1-201ENST00000521832 460 ntBASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 AP001781.2-201ENST00000529841 783 ntTSL 3 BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 REG4-204ENST00000530654 612 ntTSL 5 BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 NPIPP1-203ENST00000547107 1071 ntBASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 AC104938.1-203ENST00000561834 546 ntTSL 3 BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 CCDC58P1-201ENST00000578567 430 ntBASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 RN7SL237P-201ENST00000580912 287 ntBASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 PCNAP1-202ENST00000595299 752 ntBASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 RN7SL82P-201ENST00000611435 237 ntBASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 HULC.1-201ENST00000612720 240 ntBASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 RN7SL628P-201ENST00000619139 237 ntBASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 AC005383.1-201ENST00000622689 534 ntBASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 AC073263.3-201ENST00000624449 858 ntBASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 AC016582.3-206ENST00000636547 207 ntBASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 OR8G3P-203ENST00000641848 1344 ntBASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SHKBP1Q8TBC3 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC8.27□□□□□ -1.08
SHKBP1Q8TBC3 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC8.27□□□□□ -1.08
SHKBP1Q8TBC3 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.08
SHKBP1Q8TBC3 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
SHKBP1Q8TBC3 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
SHKBP1Q8TBC3 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC8.27□□□□□ -1.08
SHKBP1Q8TBC3 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.08
SHKBP1Q8TBC3 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
SHKBP1Q8TBC3 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
SHKBP1Q8TBC3 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 RERE-203ENST00000400907 2973 ntTSL 5 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AC026464.2-201ENST00000567834 2421 ntBASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 DYNLT3-202ENST00000378581 920 ntTSL 2 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AL035698.1-201ENST00000405812 564 ntBASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AC092865.3-201ENST00000425390 1026 ntBASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AL589823.1-201ENST00000429577 183 ntBASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AL645936.2-201ENST00000430565 928 ntBASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AC000362.1-201ENST00000433725 425 ntBASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 BMI1P1-201ENST00000445879 941 ntBASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 VN1R96P-201ENST00000446052 858 ntBASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 USP9YP25-201ENST00000457708 443 ntBASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AL590326.1-201ENST00000460857 334 ntBASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 CAPSL-204ENST00000514524 656 ntTSL 2 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 MTCYBP20-201ENST00000524239 1129 ntBASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AC092868.1-201ENST00000557949 802 ntBASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 MTND3P13-201ENST00000574391 343 ntBASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC8.27□□□□□ -1.09
SHKBP1Q8TBC3 MIR5010-201ENST00000582846 120 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms