Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC017037.4-201ENST00000624526 826 ntBASIC6.91□□□□□ -1.3
SNX18Q96RF0 MIR3120-201ENST00000636555 81 ntBASIC6.91□□□□□ -1.3
SNX18Q96RF0 CASC19-208ENST00000641056 1292 ntBASIC6.91□□□□□ -1.3
SNX18Q96RF0 CASC19-227ENST00000641411 1285 ntBASIC6.91□□□□□ -1.3
SNX18Q96RF0 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 PSMC1P7-201ENST00000495689 1315 ntBASIC6.91□□□□□ -1.3
SNX18Q96RF0 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 AC024610.2-203ENST00000636084 1348 ntTSL 5 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
SNX18Q96RF0 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SNX18Q96RF0 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SNX18Q96RF0 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SNX18Q96RF0 NF1P7-201ENST00000612076 1530 ntBASIC6.91□□□□□ -1.3
SNX18Q96RF0 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SNX18Q96RF0 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SNX18Q96RF0 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SNX18Q96RF0 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SNX18Q96RF0 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
SNX18Q96RF0 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SNX18Q96RF0 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SNX18Q96RF0 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SNX18Q96RF0 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SNX18Q96RF0 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SNX18Q96RF0 RN7SKP77-201ENST00000363261 353 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 SNORD46-201ENST00000364043 104 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SNX18Q96RF0 RPL34P19-201ENST00000415903 342 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 RBMY2FP-202ENST00000420346 1263 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 CLCN3P1-201ENST00000423965 1017 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 RPL19P21-201ENST00000424919 591 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 METTL8P1-201ENST00000428182 611 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 GAPDHP32-201ENST00000433816 998 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 OR3B1P-201ENST00000437536 893 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SNX18Q96RF0 AL161454.1-201ENST00000446226 569 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 CEACAMP5-201ENST00000448037 961 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 RPL12P7-201ENST00000493832 494 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SNX18Q96RF0 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SNX18Q96RF0 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 AC090589.2-201ENST00000532022 332 ntTSL 3 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 AP005597.1-201ENST00000534192 802 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SNX18Q96RF0 AEBP2-207ENST00000541908 975 ntAPPRIS ALT2 TSL 3 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 TMEM106C-219ENST00000552546 742 ntTSL 4 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 AC142086.3-201ENST00000563896 802 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 DNM1P34-202ENST00000567850 315 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 MIR3689F-201ENST00000579617 66 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 AC073911.1-201ENST00000592296 504 ntTSL 5 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 AC139493.1-201ENST00000604368 397 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 AC008626.1-201ENST00000604384 255 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 AL513218.1-201ENST00000606527 391 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 AL451054.3-201ENST00000611115 776 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 AC003001.2-201ENST00000616294 831 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 AL353608.4-201ENST00000624487 1188 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 AC010653.3-201ENST00000635332 232 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 AC091948.2-201ENST00000636510 279 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC6.9□□□□□ -1.3
SNX18Q96RF0 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
SNX18Q96RF0 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SNX18Q96RF0 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SNX18Q96RF0 AC138915.4-201ENST00000565549 4147 ntBASIC6.9□□□□□ -1.31
SNX18Q96RF0 DNAAF4-203ENST00000448430 1445 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SNX18Q96RF0 AL049869.1-201ENST00000556933 1402 ntBASIC6.9□□□□□ -1.31
SNX18Q96RF0 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SNX18Q96RF0 LPAL2-203ENST00000454031 2498 ntBASIC6.9□□□□□ -1.31
SNX18Q96RF0 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SNX18Q96RF0 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SNX18Q96RF0 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
SNX18Q96RF0 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SNX18Q96RF0 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SNX18Q96RF0 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.9□□□□□ -1.31
SNX18Q96RF0 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
SNX18Q96RF0 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SNX18Q96RF0 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SNX18Q96RF0 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SNX18Q96RF0 MELK-208ENST00000536987 2125 ntTSL 2 BASIC6.89□□□□□ -1.31
SNX18Q96RF0 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SNX18Q96RF0 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms