Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AC183089.2-201ENST00000637931 916 ntBASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 Z93929.1-201ENST00000418200 1475 ntBASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
CCNB1IP1Q9NPC3 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 MAPK10-383ENST00000642032 3390 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 AL627309.5-203ENST00000466557 1301 ntTSL 5 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 NF1P7-201ENST00000612076 1530 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 CDYLP1-201ENST00000419017 1458 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 RNA5SP463-201ENST00000363030 120 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 MIR199B-201ENST00000384849 110 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 ISY1-202ENST00000393292 988 ntTSL 5 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 RPL23AP34-201ENST00000423483 410 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 Z83313.1-201ENST00000433780 718 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 AL590682.1-201ENST00000437248 344 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 LINC02474-202ENST00000441160 1148 ntTSL 5 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 LINC00331-201ENST00000446391 376 ntTSL 5 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 AC093157.1-205ENST00000449473 1298 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 AL357037.1-201ENST00000454758 322 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 RN7SL834P-201ENST00000461450 286 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 PGBD4P1-201ENST00000473644 407 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 AC005550.2-201ENST00000476382 318 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 ALG13-214ENST00000482742 620 ntTSL 2 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 LINC02200-203ENST00000513687 541 ntTSL 3 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 AC027801.3-201ENST00000515049 698 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 RN7SKP105-201ENST00000517192 314 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 AC013643.2-201ENST00000521510 584 ntTSL 4 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 AC026111.1-201ENST00000551090 1195 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 LINC00674-202ENST00000590734 160 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 AC004918.3-201ENST00000602609 925 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 MARK3P1-201ENST00000604796 643 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 AL513218.1-201ENST00000606527 391 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 RN7SL3-201ENST00000610674 299 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 AC073342.2-201ENST00000595842 1800 ntBASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.82□□□□□ -1.32
CCNB1IP1Q9NPC3 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 NRIR-201ENST00000366140 799 ntTSL 3 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 PHBP1-201ENST00000392260 808 ntBASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 TMEM199-202ENST00000395404 971 ntTSL 5 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 AC133644.1-201ENST00000398171 937 ntBASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 AL390039.1-201ENST00000399148 611 ntBASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 CNN3P1-201ENST00000401596 935 ntBASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 PKMP3-201ENST00000405497 715 ntBASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 AL034372.1-201ENST00000407586 754 ntBASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.81□□□□□ -1.32
CCNB1IP1Q9NPC3 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms