Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC133569.1-201ENST00000564327 373 ntBASIC7.79□□□□□ -1.16
NEK3P51956 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC7.79□□□□□ -1.16
NEK3P51956 RN7SL237P-201ENST00000580912 287 ntBASIC7.79□□□□□ -1.16
NEK3P51956 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC7.79□□□□□ -1.16
NEK3P51956 AC073389.3-201ENST00000609434 935 ntBASIC7.79□□□□□ -1.16
NEK3P51956 AL353898.2-201ENST00000623000 255 ntBASIC7.79□□□□□ -1.16
NEK3P51956 ZBTB20-AS5-203ENST00000628886 819 ntTSL 5 BASIC7.79□□□□□ -1.16
NEK3P51956 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC7.79□□□□□ -1.16
NEK3P51956 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NEK3P51956 TRIM51HP-202ENST00000530412 1823 ntBASIC7.79□□□□□ -1.16
NEK3P51956 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NEK3P51956 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
NEK3P51956 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
NEK3P51956 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.79□□□□□ -1.16
NEK3P51956 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NEK3P51956 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NEK3P51956 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NEK3P51956 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NEK3P51956 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NEK3P51956 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.79□□□□□ -1.16
NEK3P51956 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
NEK3P51956 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.79□□□□□ -1.16
NEK3P51956 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.79□□□□□ -1.16
NEK3P51956 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NEK3P51956 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NEK3P51956 PLSCR2-205ENST00000497985 1441 ntTSL 2 BASIC7.78□□□□□ -1.16
NEK3P51956 FADS2P1-201ENST00000611807 1446 ntBASIC7.78□□□□□ -1.16
NEK3P51956 FGG-204ENST00000405164 1539 ntTSL 5 BASIC7.78□□□□□ -1.16
NEK3P51956 AC130464.1-201ENST00000416201 1500 ntBASIC7.78□□□□□ -1.16
NEK3P51956 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NEK3P51956 NF1P7-201ENST00000612076 1530 ntBASIC7.78□□□□□ -1.16
NEK3P51956 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NEK3P51956 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NEK3P51956 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
NEK3P51956 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NEK3P51956 OR9K2-201ENST00000305377 1122 ntBASIC7.78□□□□□ -1.16
NEK3P51956 SNORD46-201ENST00000364043 104 ntBASIC7.78□□□□□ -1.16
NEK3P51956 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NEK3P51956 SNORA70I-201ENST00000384544 135 ntBASIC7.78□□□□□ -1.16
NEK3P51956 RNA5SP23-201ENST00000391006 105 ntBASIC7.78□□□□□ -1.16
NEK3P51956 ISY1-202ENST00000393292 988 ntTSL 5 BASIC7.78□□□□□ -1.16
NEK3P51956 NHP2P2-201ENST00000396362 460 ntBASIC7.78□□□□□ -1.16
NEK3P51956 TERF1P4-201ENST00000399580 1115 ntBASIC7.78□□□□□ -1.16
NEK3P51956 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC7.78□□□□□ -1.16
NEK3P51956 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC7.78□□□□□ -1.16
NEK3P51956 ELOBP4-201ENST00000423418 296 ntBASIC7.78□□□□□ -1.16
NEK3P51956 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC7.78□□□□□ -1.16
NEK3P51956 RPSAP62-201ENST00000432596 833 ntBASIC7.78□□□□□ -1.16
NEK3P51956 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.78□□□□□ -1.16
NEK3P51956 HIST1H2APS6-201ENST00000448609 364 ntBASIC7.78□□□□□ -1.16
NEK3P51956 PCMTD1P3-201ENST00000451824 472 ntBASIC7.78□□□□□ -1.16
NEK3P51956 RPL34P22-201ENST00000468193 318 ntBASIC7.78□□□□□ -1.16
NEK3P51956 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC7.78□□□□□ -1.16
NEK3P51956 RN7SL549P-201ENST00000478997 282 ntBASIC7.78□□□□□ -1.16
NEK3P51956 RN7SL282P-201ENST00000479676 297 ntBASIC7.78□□□□□ -1.16
NEK3P51956 RN7SL647P-201ENST00000485429 300 ntBASIC7.78□□□□□ -1.16
NEK3P51956 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC7.78□□□□□ -1.16
NEK3P51956 SUMO2P17-201ENST00000504438 285 ntBASIC7.78□□□□□ -1.16
NEK3P51956 SSX8-201ENST00000506270 579 ntBASIC7.78□□□□□ -1.16
NEK3P51956 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC7.78□□□□□ -1.16
NEK3P51956 RN7SKP5-201ENST00000517045 272 ntBASIC7.78□□□□□ -1.16
NEK3P51956 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
NEK3P51956 AP001124.1-201ENST00000529628 385 ntBASIC7.78□□□□□ -1.16
NEK3P51956 AP005597.1-201ENST00000534192 802 ntBASIC7.78□□□□□ -1.16
NEK3P51956 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
NEK3P51956 DCN-207ENST00000546370 586 ntTSL 3 BASIC7.78□□□□□ -1.16
NEK3P51956 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NEK3P51956 GNG2-215ENST00000557376 573 ntTSL 4 BASIC7.78□□□□□ -1.16
NEK3P51956 LINC00520-206ENST00000560336 883 ntTSL 3 BASIC7.78□□□□□ -1.16
NEK3P51956 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC7.78□□□□□ -1.16
NEK3P51956 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC7.78□□□□□ -1.16
NEK3P51956 MIR5192-201ENST00000579892 92 ntBASIC7.78□□□□□ -1.16
NEK3P51956 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC7.78□□□□□ -1.16
NEK3P51956 AC096586.2-201ENST00000610260 441 ntBASIC7.78□□□□□ -1.16
NEK3P51956 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC7.78□□□□□ -1.16
NEK3P51956 5S_rRNA.20-201ENST00000612104 118 ntBASIC7.78□□□□□ -1.16
NEK3P51956 AC005609.2-201ENST00000623320 592 ntBASIC7.78□□□□□ -1.16
NEK3P51956 MTCO1P1-201ENST00000624263 1081 ntBASIC7.78□□□□□ -1.16
NEK3P51956 AC027348.2-201ENST00000624375 642 ntBASIC7.78□□□□□ -1.16
NEK3P51956 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
NEK3P51956 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC7.78□□□□□ -1.16
NEK3P51956 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
NEK3P51956 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
NEK3P51956 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
NEK3P51956 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NEK3P51956 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NEK3P51956 UGT2B25P-201ENST00000511504 1586 ntBASIC7.78□□□□□ -1.16
NEK3P51956 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.78□□□□□ -1.16
NEK3P51956 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC7.78□□□□□ -1.16
NEK3P51956 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NEK3P51956 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.78□□□□□ -1.16
NEK3P51956 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
NEK3P51956 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
NEK3P51956 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.78□□□□□ -1.16
NEK3P51956 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
NEK3P51956 AC006600.2-201ENST00000624834 2506 ntBASIC7.78□□□□□ -1.16
NEK3P51956 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
NEK3P51956 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NEK3P51956 GOT2P1-201ENST00000440922 1309 ntBASIC7.78□□□□□ -1.16
NEK3P51956 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms