Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL353898.2-201ENST00000623000 255 ntBASIC7.67□□□□□ -1.18
SLC1A1P43005 AC012100.3-201ENST00000624738 575 ntBASIC7.67□□□□□ -1.18
SLC1A1P43005 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC7.67□□□□□ -1.18
SLC1A1P43005 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SLC1A1P43005 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.67□□□□□ -1.18
SLC1A1P43005 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.67□□□□□ -1.18
SLC1A1P43005 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SLC1A1P43005 VEZF1P1-201ENST00000423931 1541 ntBASIC7.67□□□□□ -1.18
SLC1A1P43005 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC7.67□□□□□ -1.18
SLC1A1P43005 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SLC1A1P43005 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SLC1A1P43005 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SLC1A1P43005 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SLC1A1P43005 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SLC1A1P43005 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.67□□□□□ -1.18
SLC1A1P43005 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
SLC1A1P43005 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SLC1A1P43005 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
SLC1A1P43005 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SLC1A1P43005 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SLC1A1P43005 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SLC1A1P43005 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SLC1A1P43005 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
SLC1A1P43005 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SLC1A1P43005 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SLC1A1P43005 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SLC1A1P43005 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
SLC1A1P43005 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SLC1A1P43005 SNORA35-201ENST00000386104 128 ntBASIC7.66□□□□□ -1.18
SLC1A1P43005 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
SLC1A1P43005 ISY1-202ENST00000393292 988 ntTSL 5 BASIC7.66□□□□□ -1.18
SLC1A1P43005 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.66□□□□□ -1.18
SLC1A1P43005 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
SLC1A1P43005 GSTA6P-201ENST00000424144 582 ntBASIC7.66□□□□□ -1.18
SLC1A1P43005 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC7.66□□□□□ -1.18
SLC1A1P43005 OR7E62P-201ENST00000456741 477 ntBASIC7.66□□□□□ -1.18
SLC1A1P43005 RN7SL325P-201ENST00000460434 283 ntBASIC7.66□□□□□ -1.18
SLC1A1P43005 RN7SL251P-201ENST00000464175 297 ntBASIC7.66□□□□□ -1.18
SLC1A1P43005 HSPE1P10-201ENST00000508631 558 ntBASIC7.66□□□□□ -1.18
SLC1A1P43005 RPL37-205ENST00000509877 637 ntTSL 5 BASIC7.66□□□□□ -1.18
SLC1A1P43005 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC7.66□□□□□ -1.18
SLC1A1P43005 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC7.66□□□□□ -1.18
SLC1A1P43005 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
SLC1A1P43005 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC7.66□□□□□ -1.18
SLC1A1P43005 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SLC1A1P43005 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.66□□□□□ -1.18
SLC1A1P43005 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.66□□□□□ -1.18
SLC1A1P43005 MIR3135A-201ENST00000578460 77 ntBASIC7.66□□□□□ -1.18
SLC1A1P43005 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC7.66□□□□□ -1.18
SLC1A1P43005 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.66□□□□□ -1.18
SLC1A1P43005 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC7.66□□□□□ -1.18
SLC1A1P43005 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC7.66□□□□□ -1.18
SLC1A1P43005 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC7.66□□□□□ -1.18
SLC1A1P43005 AC243830.2-201ENST00000618067 630 ntBASIC7.66□□□□□ -1.18
SLC1A1P43005 EEF1A1P22-201ENST00000559385 1380 ntBASIC7.66□□□□□ -1.18
SLC1A1P43005 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SLC1A1P43005 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC7.66□□□□□ -1.18
SLC1A1P43005 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
SLC1A1P43005 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SLC1A1P43005 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SLC1A1P43005 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.66□□□□□ -1.18
SLC1A1P43005 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.66□□□□□ -1.18
SLC1A1P43005 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.66□□□□□ -1.18
SLC1A1P43005 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SLC1A1P43005 AC006116.1-201ENST00000587908 2171 ntBASIC7.66□□□□□ -1.18
SLC1A1P43005 DDX50P1-201ENST00000438163 2400 ntBASIC7.66□□□□□ -1.18
SLC1A1P43005 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SLC1A1P43005 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.65□□□□□ -1.18
SLC1A1P43005 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SLC1A1P43005 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SLC1A1P43005 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SLC1A1P43005 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
SLC1A1P43005 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.65□□□□□ -1.18
SLC1A1P43005 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SLC1A1P43005 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.65□□□□□ -1.18
SLC1A1P43005 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.65□□□□□ -1.18
SLC1A1P43005 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SLC1A1P43005 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
SLC1A1P43005 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC7.65□□□□□ -1.18
SLC1A1P43005 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SLC1A1P43005 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SLC1A1P43005 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SLC1A1P43005 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
SLC1A1P43005 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SLC1A1P43005 PTMAP8-201ENST00000397729 342 ntBASIC7.65□□□□□ -1.18
SLC1A1P43005 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SLC1A1P43005 VN1R33P-201ENST00000411800 887 ntBASIC7.65□□□□□ -1.18
SLC1A1P43005 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
SLC1A1P43005 FDPSP1-201ENST00000424976 1071 ntBASIC7.65□□□□□ -1.18
SLC1A1P43005 AC130472.1-201ENST00000427885 309 ntBASIC7.65□□□□□ -1.18
SLC1A1P43005 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC7.65□□□□□ -1.18
SLC1A1P43005 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC7.65□□□□□ -1.18
SLC1A1P43005 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.65□□□□□ -1.18
SLC1A1P43005 OR7E102P-201ENST00000448855 1015 ntBASIC7.65□□□□□ -1.18
SLC1A1P43005 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC7.65□□□□□ -1.18
SLC1A1P43005 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.65□□□□□ -1.18
SLC1A1P43005 AC117395.2-201ENST00000463122 1128 ntBASIC7.65□□□□□ -1.18
SLC1A1P43005 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.65□□□□□ -1.18
SLC1A1P43005 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC7.65□□□□□ -1.18
SLC1A1P43005 AC117392.1-201ENST00000487061 596 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms