Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
HLA-DOBP13765 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HLA-DOBP13765 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC6.59□□□□□ -1.35
HLA-DOBP13765 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HLA-DOBP13765 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
HLA-DOBP13765 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HLA-DOBP13765 FOLH1B-202ENST00000529567 2145 ntBASIC6.59□□□□□ -1.35
HLA-DOBP13765 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.59□□□□□ -1.35
HLA-DOBP13765 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.59□□□□□ -1.35
HLA-DOBP13765 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.36
HLA-DOBP13765 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
HLA-DOBP13765 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
HLA-DOBP13765 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.59□□□□□ -1.36
HLA-DOBP13765 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
HLA-DOBP13765 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
HLA-DOBP13765 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.59□□□□□ -1.36
HLA-DOBP13765 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC6.59□□□□□ -1.36
HLA-DOBP13765 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-DOBP13765 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-DOBP13765 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-DOBP13765 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 SNORA51.7-201ENST00000384171 134 ntBASIC6.58□□□□□ -1.36
HLA-DOBP13765 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-DOBP13765 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 OR8B9P-201ENST00000419756 925 ntBASIC6.58□□□□□ -1.36
HLA-DOBP13765 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 TAS2R2P-201ENST00000421146 910 ntBASIC6.58□□□□□ -1.36
HLA-DOBP13765 GAPDHP46-201ENST00000424043 994 ntBASIC6.58□□□□□ -1.36
HLA-DOBP13765 RPL6P2-201ENST00000425480 783 ntBASIC6.58□□□□□ -1.36
HLA-DOBP13765 GYG1P2-201ENST00000426437 1006 ntBASIC6.58□□□□□ -1.36
HLA-DOBP13765 AC244505.2-201ENST00000435089 759 ntBASIC6.58□□□□□ -1.36
HLA-DOBP13765 AC013429.1-201ENST00000456604 422 ntBASIC6.58□□□□□ -1.36
HLA-DOBP13765 AC117395.2-201ENST00000463122 1128 ntBASIC6.58□□□□□ -1.36
HLA-DOBP13765 RPS14P7-201ENST00000473701 448 ntBASIC6.58□□□□□ -1.36
HLA-DOBP13765 RN7SL282P-201ENST00000479676 297 ntBASIC6.58□□□□□ -1.36
HLA-DOBP13765 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 PTTG3P-201ENST00000521862 606 ntBASIC6.58□□□□□ -1.36
HLA-DOBP13765 AC084251.1-201ENST00000521867 382 ntBASIC6.58□□□□□ -1.36
HLA-DOBP13765 EIF4EP5-201ENST00000528228 640 ntBASIC6.58□□□□□ -1.36
HLA-DOBP13765 OR5F2P-201ENST00000532761 941 ntBASIC6.58□□□□□ -1.36
HLA-DOBP13765 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-DOBP13765 BMS1P15-201ENST00000554269 1141 ntBASIC6.58□□□□□ -1.36
HLA-DOBP13765 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-DOBP13765 AC133569.1-201ENST00000564327 373 ntBASIC6.58□□□□□ -1.36
HLA-DOBP13765 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 RN7SL835P-201ENST00000579920 262 ntBASIC6.58□□□□□ -1.36
HLA-DOBP13765 AL136985.2-201ENST00000607372 535 ntBASIC6.58□□□□□ -1.36
HLA-DOBP13765 AL121583.1-201ENST00000612444 682 ntBASIC6.58□□□□□ -1.36
HLA-DOBP13765 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-DOBP13765 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 AC092999.1-201ENST00000624004 1924 ntBASIC6.58□□□□□ -1.36
HLA-DOBP13765 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-DOBP13765 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-DOBP13765 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HLA-DOBP13765 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
HLA-DOBP13765 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 MFSD8-217ENST00000641178 4374 ntBASIC6.57□□□□□ -1.36
HLA-DOBP13765 AC130456.1-201ENST00000565085 1363 ntBASIC6.57□□□□□ -1.36
HLA-DOBP13765 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOBP13765 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOBP13765 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOBP13765 AL590065.1-201ENST00000603371 4774 ntBASIC6.57□□□□□ -1.36
HLA-DOBP13765 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOBP13765 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-DOBP13765 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 AL021877.2-201ENST00000624442 10684 ntBASIC6.57□□□□□ -1.36
HLA-DOBP13765 AL138847.1-201ENST00000258651 546 ntBASIC6.57□□□□□ -1.36
HLA-DOBP13765 RNA5SP260-201ENST00000363849 111 ntBASIC6.57□□□□□ -1.36
HLA-DOBP13765 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 RPL24P7-201ENST00000399435 453 ntBASIC6.57□□□□□ -1.36
HLA-DOBP13765 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 SNORA3.1-201ENST00000408166 111 ntBASIC6.57□□□□□ -1.36
HLA-DOBP13765 LSM5-202ENST00000409292 538 ntTSL 2 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 AC020983.1-201ENST00000417063 543 ntBASIC6.57□□□□□ -1.36
HLA-DOBP13765 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 AL357632.1-201ENST00000426688 643 ntBASIC6.57□□□□□ -1.36
HLA-DOBP13765 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 FUNDC2P2-202ENST00000443452 493 ntBASIC6.57□□□□□ -1.36
HLA-DOBP13765 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 AC026336.1-201ENST00000466577 351 ntBASIC6.57□□□□□ -1.36
HLA-DOBP13765 RPL34P22-201ENST00000468193 318 ntBASIC6.57□□□□□ -1.36
HLA-DOBP13765 AC040975.1-201ENST00000472104 316 ntBASIC6.57□□□□□ -1.36
HLA-DOBP13765 RN7SL516P-201ENST00000496127 297 ntBASIC6.57□□□□□ -1.36
HLA-DOBP13765 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HLA-DOBP13765 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms