Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC129908.1-201ENST00000624553 648 ntBASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 MAPK10-279ENST00000641157 2449 ntBASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 AL117339.4-201ENST00000608335 7063 ntBASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NPIPA3F8WFD2 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 KYNUP2-201ENST00000582280 1329 ntBASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 AC123769.2-201ENST00000624332 5984 ntBASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 RNA5SP260-201ENST00000363849 111 ntBASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 SNORA2C-201ENST00000408564 137 ntBASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 GAS8-AS1-201ENST00000408886 435 ntBASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 FECHP1-201ENST00000431896 1214 ntBASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 ANKRD54P1-201ENST00000433115 471 ntBASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 RPL24P8-201ENST00000446071 474 ntBASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 TUBBP11-201ENST00000472255 252 ntBASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 DKK2-202ENST00000510463 908 ntTSL 3 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 AC016559.1-201ENST00000511420 199 ntBASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 SLC25A51P2-201ENST00000535708 889 ntBASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 AC087257.2-201ENST00000538759 928 ntBASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 AC005518.2-201ENST00000603254 282 ntBASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 AL451085.1-201ENST00000604546 690 ntBASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 AC025162.2-201ENST00000619602 560 ntBASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 AC087045.3-201ENST00000623046 2468 ntBASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 AL357556.1-201ENST00000421884 1388 ntBASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPIPA3F8WFD2 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 AL162171.3-201ENST00000617439 3178 ntBASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 RERE-203ENST00000400907 2973 ntTSL 5 BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 SLC25A5P7-201ENST00000406156 896 ntBASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 TYMSP1-201ENST00000407851 869 ntBASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 AL451074.4-201ENST00000447545 470 ntBASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 AL390026.1-201ENST00000456647 457 ntBASIC6.78□□□□□ -1.32
NPIPA3F8WFD2 RN7SL791P-201ENST00000467868 295 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms