Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AL590128.1-201ENST00000433407 286 ntBASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 AC063955.1-201ENST00000462872 685 ntBASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 RPL9P15-201ENST00000491096 532 ntBASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 CASC11-203ENST00000519071 791 ntTSL 3 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 OR4A1P-201ENST00000532342 920 ntBASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 AC007671.1-201ENST00000616957 830 ntBASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 AL512329.1-201ENST00000404600 1592 ntBASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 RPL12P23-201ENST00000405880 490 ntBASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 RN7SL143P-201ENST00000496780 297 ntBASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 AC114940.1-201ENST00000512162 1265 ntBASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 AC027801.3-201ENST00000515049 698 ntBASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 MIR6780B-201ENST00000610307 79 ntBASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 AC025287.2-201ENST00000621911 668 ntBASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC8.47□□□□□ -1.05
CDK5RAP2Q96SN8 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC8.46□□□□□ -1.05
CDK5RAP2Q96SN8 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
CDK5RAP2Q96SN8 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CDK5RAP2Q96SN8 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CDK5RAP2Q96SN8 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
CDK5RAP2Q96SN8 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC8.46□□□□□ -1.05
CDK5RAP2Q96SN8 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
CDK5RAP2Q96SN8 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
CDK5RAP2Q96SN8 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
CDK5RAP2Q96SN8 TRIM53CP-201ENST00000531490 1354 ntBASIC8.46□□□□□ -1.05
CDK5RAP2Q96SN8 ATP5BP1-201ENST00000411980 1574 ntBASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 CHCHD3P1-201ENST00000425516 676 ntBASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 AC123904.1-201ENST00000441072 368 ntBASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 RNA5SP518-201ENST00000515957 119 ntBASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 AC113191.1-201ENST00000517759 403 ntBASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 AL139317.4-201ENST00000605879 760 ntBASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 AC004943.1-203ENST00000624370 1074 ntBASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 AC061975.5-201ENST00000584928 1441 ntBASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 AC009220.2-201ENST00000489759 1751 ntBASIC8.46□□□□□ -1.06
CDK5RAP2Q96SN8 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
CDK5RAP2Q96SN8 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDK5RAP2Q96SN8 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CDK5RAP2Q96SN8 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC8.45□□□□□ -1.06
CDK5RAP2Q96SN8 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDK5RAP2Q96SN8 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
CDK5RAP2Q96SN8 RN7SKP55-201ENST00000364888 307 ntBASIC8.45□□□□□ -1.06
CDK5RAP2Q96SN8 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms