Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MIR3714-201ENST00000579507 65 ntBASIC6.97□□□□□ -1.29
SNX18Q96RF0 MIR4437-201ENST00000581331 60 ntBASIC6.97□□□□□ -1.29
SNX18Q96RF0 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.97□□□□□ -1.29
SNX18Q96RF0 AC012065.3-201ENST00000602736 439 ntBASIC6.97□□□□□ -1.29
SNX18Q96RF0 AL133351.5-201ENST00000612789 106 ntBASIC6.97□□□□□ -1.29
SNX18Q96RF0 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.97□□□□□ -1.29
SNX18Q96RF0 AC106730.3-201ENST00000624568 641 ntBASIC6.97□□□□□ -1.29
SNX18Q96RF0 AC080188.3-201ENST00000624842 748 ntBASIC6.97□□□□□ -1.29
SNX18Q96RF0 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC6.97□□□□□ -1.29
SNX18Q96RF0 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SNX18Q96RF0 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SNX18Q96RF0 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
SNX18Q96RF0 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SNX18Q96RF0 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SNX18Q96RF0 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SNX18Q96RF0 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.97□□□□□ -1.29
SNX18Q96RF0 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC6.97□□□□□ -1.29
SNX18Q96RF0 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SNX18Q96RF0 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SNX18Q96RF0 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SNX18Q96RF0 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SNX18Q96RF0 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SNX18Q96RF0 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SNX18Q96RF0 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SNX18Q96RF0 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.97□□□□□ -1.29
SNX18Q96RF0 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
SNX18Q96RF0 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
SNX18Q96RF0 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SNX18Q96RF0 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SNX18Q96RF0 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.29
SNX18Q96RF0 AC107058.1-201ENST00000513297 1384 ntBASIC6.96□□□□□ -1.29
SNX18Q96RF0 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC6.96□□□□□ -1.29
SNX18Q96RF0 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
SNX18Q96RF0 HSPD1P4-201ENST00000547203 1702 ntBASIC6.96□□□□□ -1.29
SNX18Q96RF0 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
SNX18Q96RF0 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SNX18Q96RF0 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SNX18Q96RF0 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
SNX18Q96RF0 IMPG1-203ENST00000369963 868 ntTSL 5 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SNX18Q96RF0 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 RN7SKP119-201ENST00000410753 273 ntBASIC6.96□□□□□ -1.3
SNX18Q96RF0 YWHAZP3-201ENST00000415292 738 ntBASIC6.96□□□□□ -1.3
SNX18Q96RF0 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 GNAI2P2-201ENST00000417003 916 ntBASIC6.96□□□□□ -1.3
SNX18Q96RF0 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 MTND2P9-201ENST00000422293 931 ntBASIC6.96□□□□□ -1.3
SNX18Q96RF0 FABP5P1-201ENST00000423401 411 ntBASIC6.96□□□□□ -1.3
SNX18Q96RF0 PAICSP1-201ENST00000425324 1217 ntBASIC6.96□□□□□ -1.3
SNX18Q96RF0 AP001595.1-201ENST00000435878 516 ntTSL 2 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 FABP5P2-201ENST00000439042 408 ntBASIC6.96□□□□□ -1.3
SNX18Q96RF0 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 RPL4P2-201ENST00000447259 1282 ntBASIC6.96□□□□□ -1.3
SNX18Q96RF0 NDUFA5P8-201ENST00000449019 346 ntBASIC6.96□□□□□ -1.3
SNX18Q96RF0 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 RN7SL740P-201ENST00000467060 344 ntBASIC6.96□□□□□ -1.3
SNX18Q96RF0 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 RPL7AP26-201ENST00000488538 813 ntBASIC6.96□□□□□ -1.3
SNX18Q96RF0 AL031864.2-201ENST00000498507 350 ntBASIC6.96□□□□□ -1.3
SNX18Q96RF0 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
SNX18Q96RF0 AC107385.1-201ENST00000507985 778 ntBASIC6.96□□□□□ -1.3
SNX18Q96RF0 RPL37-205ENST00000509877 637 ntTSL 5 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SNX18Q96RF0 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 ETFRF1-210ENST00000556927 833 ntAPPRIS ALT1 TSL 3 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 AC009118.1-201ENST00000566019 374 ntTSL 2 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SNX18Q96RF0 STX8-209ENST00000574431 731 ntTSL 3 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 RN7SL473P-201ENST00000580341 299 ntBASIC6.96□□□□□ -1.3
SNX18Q96RF0 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SNX18Q96RF0 AC090699.1-201ENST00000586264 321 ntBASIC6.96□□□□□ -1.3
SNX18Q96RF0 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 BX649601.1-201ENST00000608264 572 ntBASIC6.96□□□□□ -1.3
SNX18Q96RF0 AC016999.2-201ENST00000614692 556 ntBASIC6.96□□□□□ -1.3
SNX18Q96RF0 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 MIR6829-201ENST00000620375 67 ntBASIC6.96□□□□□ -1.3
SNX18Q96RF0 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SNX18Q96RF0 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SNX18Q96RF0 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 ZNF300P1-201ENST00000356555 1822 ntBASIC6.96□□□□□ -1.3
SNX18Q96RF0 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SNX18Q96RF0 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SNX18Q96RF0 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.96□□□□□ -1.3
SNX18Q96RF0 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SNX18Q96RF0 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms