Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC021074.2-201ENST00000468434 172 ntBASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 RN7SL233P-201ENST00000469988 277 ntBASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 NMNAT1P4-201ENST00000505598 840 ntBASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 LINC01588-213ENST00000557142 492 ntTSL 3 BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 AC114810.1-201ENST00000607415 473 ntBASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 AC079779.3-218ENST00000612487 940 ntTSL 5 BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 SF3A3P1-201ENST00000446317 1477 ntBASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 AL133243.4-201ENST00000623116 3109 ntBASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CCDC50Q8IVM0 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 AL133320.1-201ENST00000621423 2352 ntBASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 AC016251.2-201ENST00000623393 3089 ntBASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 OR2AK2-201ENST00000366480 1154 ntAPPRIS ALT2 BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 CREM-214ENST00000395887 849 ntTSL 5 BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 AC005040.1-201ENST00000437783 482 ntBASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 AC087499.3-202ENST00000441215 1173 ntBASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 AC245047.6-201ENST00000445444 617 ntBASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 CEACAMP5-201ENST00000448037 961 ntBASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 RPL10P6-201ENST00000457497 318 ntBASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 CREM-224ENST00000468236 582 ntTSL 3 BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 CREM-234ENST00000484283 660 ntTSL 5 BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 RN7SL869P-201ENST00000497032 300 ntBASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 AC025252.2-201ENST00000537470 502 ntBASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 RN7SL237P-201ENST00000580912 287 ntBASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 AC010618.3-203ENST00000595116 313 ntTSL 3 BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 AC012488.1-201ENST00000611221 640 ntBASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CCDC50Q8IVM0 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.84□□□□□ -1.16
CCDC50Q8IVM0 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
CCDC50Q8IVM0 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
CCDC50Q8IVM0 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.16
CCDC50Q8IVM0 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 BIN2P2-201ENST00000503900 1303 ntBASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 RN7SKP76-201ENST00000364419 323 ntBASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 LARP1P1-201ENST00000407692 292 ntBASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 BMS1P12-201ENST00000428213 706 ntBASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 EEF1A1P27-201ENST00000429983 1135 ntBASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 MORF4L1P5-201ENST00000433352 961 ntBASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 FO393419.1-201ENST00000443746 355 ntBASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC7.83□□□□□ -1.16
CCDC50Q8IVM0 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms