Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 RFX4-202ENST00000357881 2565 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 AC026464.2-201ENST00000567834 2421 ntBASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 BRAFP1-201ENST00000445336 2703 ntBASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 HCG18-238ENST00000449544 4262 ntTSL 2 BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 CALML4-208ENST00000540479 4603 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 LARP1P1-201ENST00000407692 292 ntBASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 FAM183DP-201ENST00000421987 399 ntBASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 FBP2P1-202ENST00000424473 530 ntBASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 AKR1B10P1-201ENST00000425765 942 ntBASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 NPM1P9-201ENST00000453156 844 ntBASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 AGKP1-201ENST00000455254 1263 ntBASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 AC066616.1-201ENST00000486795 413 ntBASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 MT1B-202ENST00000562399 351 ntTSL 3 BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 WDR45BP1-201ENST00000583470 1029 ntBASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 C4orf46-202ENST00000508457 3358 ntTSL 5 BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 CBFA2T2-206ENST00000397800 7449 ntTSL 5 BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 RNA5SP472-201ENST00000363868 119 ntBASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 MIR99A-201ENST00000384906 81 ntBASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 EIF4E2P2-201ENST00000492033 736 ntBASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 PGAM4P2-201ENST00000512491 721 ntBASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 DCAF13P2-201ENST00000514188 555 ntBASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 RN7SKP64-201ENST00000517206 328 ntBASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 IGHVIII-25-1-201ENST00000522143 241 ntBASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 AP005597.2-201ENST00000526238 341 ntBASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 AC096708.2-201ENST00000577676 512 ntBASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 FCGR1CP-201ENST00000579737 1127 ntBASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 SAMMSON-222ENST00000641901 2727 ntBASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDK5RAP2Q96SN8 OR52K3P-202ENST00000641797 1729 ntBASIC8.52□□□□□ -1.04
CDK5RAP2Q96SN8 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 VDAC1P10-201ENST00000416715 891 ntBASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 AL109628.1-201ENST00000556877 366 ntBASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 AC027796.1-201ENST00000575593 512 ntBASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 MIR4312-201ENST00000579909 76 ntBASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 CDH23-203ENST00000398788 4329 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 AL353807.3-201ENST00000500626 2505 ntBASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDK5RAP2Q96SN8 MAPK10-281ENST00000641170 3070 ntBASIC8.51□□□□□ -1.05
CDK5RAP2Q96SN8 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CDK5RAP2Q96SN8 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CDK5RAP2Q96SN8 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC8.51□□□□□ -1.05
CDK5RAP2Q96SN8 THAP12P3-201ENST00000456373 2266 ntBASIC8.51□□□□□ -1.05
CDK5RAP2Q96SN8 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CDK5RAP2Q96SN8 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms