Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDK5RAP2Q96SN8 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CDK5RAP2Q96SN8 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 SNORA3.1-201ENST00000408166 111 ntBASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 GAPDHP51-201ENST00000426454 1000 ntBASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 BX005266.3-201ENST00000443013 1075 ntBASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 AC096922.1-201ENST00000461635 651 ntBASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 RN7SL849P-201ENST00000485236 295 ntBASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 GNG2-203ENST00000553432 577 ntTSL 4 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 U91328.4-201ENST00000608919 517 ntBASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 TRIM64EP-201ENST00000531233 1307 ntBASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 FKBP14-201ENST00000222803 4960 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 CASC15-203ENST00000605917 4461 ntBASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 XRCC6P5-201ENST00000435236 1795 ntBASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 AL355375.1-201ENST00000405686 392 ntBASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 PIP5K1P2-201ENST00000437005 1120 ntBASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 AL604028.2-201ENST00000437848 788 ntBASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 PA2G4P1-201ENST00000442248 1197 ntBASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 RPL23AP80-201ENST00000495605 424 ntBASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 AC008868.1-201ENST00000509786 737 ntBASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 AC013283.1-201ENST00000557282 492 ntBASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC8.55□□□□□ -1.04
CDK5RAP2Q96SN8 AC051619.3-201ENST00000560646 2426 ntBASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 NOTCH2NL-203ENST00000578207 5042 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 EEF1GP6-201ENST00000402309 905 ntBASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 AL161742.1-201ENST00000418154 584 ntBASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 RN7SL836P-201ENST00000476140 296 ntBASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 CFI-204ENST00000510800 667 ntTSL 2 BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 AC120036.3-201ENST00000517826 292 ntBASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 AC131935.1-201ENST00000524621 333 ntBASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 AP001803.1-201ENST00000525668 147 ntBASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 UBE2CP1-201ENST00000557130 554 ntBASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 AL355333.1-201ENST00000605632 279 ntBASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 AC139795.3-201ENST00000606358 541 ntBASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 AL136985.2-201ENST00000607372 535 ntBASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 AL031777.2-201ENST00000611953 196 ntBASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC8.54□□□□□ -1.04
CDK5RAP2Q96SN8 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms