Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 IRF9-204ENST00000559229 567 ntTSL 213.25□□□□□ -0.292e-9■■□□□ 11.7
PRPF8Q6P2Q9 CHRD-217ENST00000496527 588 ntTSL 419.11■□□□□ 0.652e-7■■□□□ 11.7
PRPF8Q6P2Q9 CHRD-215ENST00000485883 568 ntTSL 417.69■□□□□ 0.422e-7■■□□□ 11.7
PRPF8Q6P2Q9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.496e-10■■□□□ 11.7
PRPF8Q6P2Q9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.45■□□□□ 0.226e-10■■□□□ 11.7
PRPF8Q6P2Q9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.136e-10■■□□□ 11.7
PRPF8Q6P2Q9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.196e-10■■□□□ 11.7
PRPF8Q6P2Q9 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.266e-10■■□□□ 11.7
PRPF8Q6P2Q9 CNOT3-207ENST00000496327 784 ntTSL 513.9□□□□□ -0.185e-7■■□□□ 11.7
PRPF8Q6P2Q9 FGFR1-216ENST00000466021 823 ntTSL 213.11□□□□□ -0.319e-7■■□□□ 11.7
PRPF8Q6P2Q9 HNRNPR-213ENST00000641107 646 nt12.22□□□□□ -0.453e-8■■□□□ 11.7
PRPF8Q6P2Q9 SEC14L1-221ENST00000588721 647 ntTSL 214.6□□□□□ -0.073e-13■■□□□ 11.7
PRPF8Q6P2Q9 SEC14L1-226ENST00000591413 918 ntTSL 214.35□□□□□ -0.113e-13■■□□□ 11.7
PRPF8Q6P2Q9 SEC14L1-215ENST00000587491 2934 ntTSL 210.54□□□□□ -0.723e-13■■□□□ 11.7
PRPF8Q6P2Q9 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.413e-7■■□□□ 11.7
PRPF8Q6P2Q9 DEF8-223ENST00000568760 579 ntTSL 413.34□□□□□ -0.276e-15■■□□□ 11.7
PRPF8Q6P2Q9 UVSSA-204ENST00000505716 549 ntTSL 39.87□□□□□ -0.831e-16■■□□□ 11.7
PRPF8Q6P2Q9 CBFA2T3-210ENST00000569464 1327 ntTSL 1 (best)11.74□□□□□ -0.531e-7■■□□□ 11.7
PRPF8Q6P2Q9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.29□□□□□ -2.362e-9■■□□□ 11.7
PRPF8Q6P2Q9 YIPF3-204ENST00000455768 843 ntTSL 517.67■□□□□ 0.428e-8■■□□□ 11.7
PRPF8Q6P2Q9 YIPF3-208ENST00000490447 1321 ntTSL 215.36■□□□□ 0.058e-8■■□□□ 11.7
PRPF8Q6P2Q9 YIPF3-214ENST00000510102 1639 ntTSL 513.16□□□□□ -0.38e-8■■□□□ 11.7
PRPF8Q6P2Q9 YIPF3-205ENST00000460547 1674 ntTSL 1 (best)13.1□□□□□ -0.318e-8■■□□□ 11.7
PRPF8Q6P2Q9 YIPF3-212ENST00000503972 933 ntTSL 512.59□□□□□ -0.398e-8■■□□□ 11.7
PRPF8Q6P2Q9 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.468e-8■■□□□ 11.7
PRPF8Q6P2Q9 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC11.51□□□□□ -0.578e-8■■□□□ 11.7
PRPF8Q6P2Q9 YIPF3-203ENST00000416380 1005 ntTSL 510.58□□□□□ -0.728e-8■■□□□ 11.7
PRPF8Q6P2Q9 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.773e-8■■□□□ 11.7
PRPF8Q6P2Q9 FAM117A-209ENST00000513602 1522 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.763e-8■■□□□ 11.7
PRPF8Q6P2Q9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.33■□□□□ 0.052e-10■■□□□ 11.7
PRPF8Q6P2Q9 LENG8-AS1-203ENST00000448978 464 ntTSL 59.53□□□□□ -0.882e-10■■□□□ 11.7
PRPF8Q6P2Q9 LENG8-AS1-202ENST00000429922 871 ntTSL 4 BASIC7.83□□□□□ -1.162e-10■■□□□ 11.7
PRPF8Q6P2Q9 NDRG1-216ENST00000521026 2145 ntTSL 210.69□□□□□ -0.72e-9■■□□□ 11.7
PRPF8Q6P2Q9 NDRG1-226ENST00000523642 507 ntTSL 310.11□□□□□ -0.792e-9■■□□□ 11.7
PRPF8Q6P2Q9 ESRP2-209ENST00000565213 398 ntTSL 312.05□□□□□ -0.486e-10■■□□□ 11.7
PRPF8Q6P2Q9 GATD1-213ENST00000532320 1273 ntTSL 1 (best)14.35□□□□□ -0.112e-7■■□□□ 11.7
PRPF8Q6P2Q9 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.92□□□□□ -0.182e-7■■□□□ 11.7
PRPF8Q6P2Q9 GATD1-216ENST00000534603 863 ntTSL 1 (best)13.86□□□□□ -0.192e-7■■□□□ 11.7
PRPF8Q6P2Q9 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.46□□□□□ -0.412e-7■■□□□ 11.7
PRPF8Q6P2Q9 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.31□□□□□ -0.442e-7■■□□□ 11.7
PRPF8Q6P2Q9 GATD1-214ENST00000532839 559 ntTSL 1 (best)12.12□□□□□ -0.472e-7■■□□□ 11.7
PRPF8Q6P2Q9 GATD1-211ENST00000529966 800 ntTSL 1 (best)11.88□□□□□ -0.512e-7■■□□□ 11.7
PRPF8Q6P2Q9 GATD1-201ENST00000319863 4357 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.872e-7■■□□□ 11.7
PRPF8Q6P2Q9 GATD1-202ENST00000354286 3973 ntTSL 58.53□□□□□ -1.042e-7■■□□□ 11.7
PRPF8Q6P2Q9 TOX4-202ENST00000447695 633 ntTSL 414.68□□□□□ -0.068e-7■■□□□ 11.7
PRPF8Q6P2Q9 TOX4-209ENST00000487242 544 ntTSL 214.68□□□□□ -0.068e-7■■□□□ 11.7
PRPF8Q6P2Q9 TOX4-201ENST00000416256 724 ntTSL 514.17□□□□□ -0.148e-7■■□□□ 11.7
PRPF8Q6P2Q9 TOX4-204ENST00000455138 549 ntTSL 414.08□□□□□ -0.168e-7■■□□□ 11.7
PRPF8Q6P2Q9 TOX4-206ENST00000457430 565 ntTSL 413.52□□□□□ -0.248e-7■■□□□ 11.7
PRPF8Q6P2Q9 TOX4-210ENST00000494242 650 ntTSL 312.63□□□□□ -0.398e-7■■□□□ 11.7
PRPF8Q6P2Q9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.41■■□□□ 1.028e-8■■□□□ 11.7
PRPF8Q6P2Q9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.89■□□□□ 0.298e-8■■□□□ 11.7
PRPF8Q6P2Q9 CRNDE-202ENST00000502066 659 ntTSL 1 (best)7.13□□□□□ -1.278e-8■■□□□ 11.7
PRPF8Q6P2Q9 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.46□□□□□ -1.548e-8■■□□□ 11.7
PRPF8Q6P2Q9 CRNDE-207ENST00000559598 696 ntTSL 1 (best)5.46□□□□□ -1.548e-8■■□□□ 11.7
PRPF8Q6P2Q9 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.79□□□□□ -1.648e-8■■□□□ 11.7
PRPF8Q6P2Q9 KIAA1468-207ENST00000587764 620 ntTSL 35.39□□□□□ -1.554e-6■■□□□ 11.7
PRPF8Q6P2Q9 PKN1-206ENST00000586237 529 ntTSL 512.6□□□□□ -0.393e-8■■□□□ 11.7
PRPF8Q6P2Q9 PKN1-213ENST00000591461 867 ntTSL 312.16□□□□□ -0.463e-8■■□□□ 11.7
PRPF8Q6P2Q9 CAPN1-223ENST00000533079 878 ntTSL 310.91□□□□□ -0.661e-8■■□□□ 11.7
PRPF8Q6P2Q9 FAM117A-208ENST00000511743 789 ntAPPRIS ALT2 TSL 39.32□□□□□ -0.923e-8■■□□□ 11.7
PRPF8Q6P2Q9 HLF-204ENST00000572002 1251 ntTSL 310.64□□□□□ -0.711e-23■■□□□ 11.7
PRPF8Q6P2Q9 HLF-203ENST00000570962 1310 ntTSL 29.98□□□□□ -0.811e-23■■□□□ 11.7
PRPF8Q6P2Q9 HLF-207ENST00000573422 493 ntTSL 49.79□□□□□ -0.841e-23■■□□□ 11.7
PRPF8Q6P2Q9 HLF-210ENST00000575345 3589 ntTSL 2 BASIC5.69□□□□□ -1.51e-23■■□□□ 11.7
PRPF8Q6P2Q9 HLF-211ENST00000575868 558 ntTSL 44.46□□□□□ -1.71e-23■■□□□ 11.7
PRPF8Q6P2Q9 SRC-208ENST00000477475 584 ntTSL 59.9□□□□□ -0.827e-10■■□□□ 11.7
PRPF8Q6P2Q9 SRC-205ENST00000467556 502 ntTSL 27.95□□□□□ -1.147e-10■■□□□ 11.7
PRPF8Q6P2Q9 EGFL7-207ENST00000492862 723 ntTSL 515.66■□□□□ 0.12e-21■■□□□ 11.7
PRPF8Q6P2Q9 EGFL7-205ENST00000490469 456 ntTSL 514.42□□□□□ -0.12e-21■■□□□ 11.7
PRPF8Q6P2Q9 BRD4-204ENST00000594066 587 ntTSL 310.63□□□□□ -0.719e-14■■□□□ 11.7
PRPF8Q6P2Q9 DGAT1-207ENST00000531896 981 ntTSL 321.09■□□□□ 0.977e-9■■□□□ 11.7
PRPF8Q6P2Q9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.51e-6■■□□□ 11.7
PRPF8Q6P2Q9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.421e-6■■□□□ 11.7
PRPF8Q6P2Q9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.351e-6■■□□□ 11.7
PRPF8Q6P2Q9 PGF-204ENST00000555234 811 ntTSL 214.58□□□□□ -0.081e-6■■□□□ 11.7
PRPF8Q6P2Q9 PGF-207ENST00000556939 1125 ntTSL 214.23□□□□□ -0.131e-6■■□□□ 11.7
PRPF8Q6P2Q9 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.53□□□□□ -0.241e-6■■□□□ 11.7
PRPF8Q6P2Q9 PGF-208ENST00000557748 875 ntTSL 211.3□□□□□ -0.61e-6■■□□□ 11.7
PRPF8Q6P2Q9 DNMT3A-215ENST00000496570 656 ntTSL 313.65□□□□□ -0.225e-11■■□□□ 11.7
PRPF8Q6P2Q9 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.49□□□□□ -0.412e-7■■□□□ 11.7
PRPF8Q6P2Q9 HS1BP3-202ENST00000402541 4358 ntTSL 1 (best) BASIC10.2□□□□□ -0.782e-7■■□□□ 11.7
PRPF8Q6P2Q9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3□□□□□ -1.932e-7■■□□□ 11.7
PRPF8Q6P2Q9 COL18A1-205ENST00000423214 839 ntTSL 514.17□□□□□ -0.141e-9■■□□□ 11.7
PRPF8Q6P2Q9 HNRNPD-209ENST00000513584 1240 ntTSL 220.18■□□□□ 0.821e-8■■□□□ 11.7
PRPF8Q6P2Q9 STAT5A-212ENST00000591556 1140 ntTSL 1 (best)14.04□□□□□ -0.166e-7■■□□□ 11.7
PRPF8Q6P2Q9 RGS12-215ENST00000509746 481 ntTSL 314.25□□□□□ -0.135e-6■■□□□ 11.7
PRPF8Q6P2Q9 RGS12-212ENST00000507041 455 ntTSL 313.53□□□□□ -0.245e-6■■□□□ 11.7
PRPF8Q6P2Q9 RGS12-218ENST00000511709 237 ntTSL 313.53□□□□□ -0.245e-6■■□□□ 11.7
PRPF8Q6P2Q9 RGS12-213ENST00000507246 387 ntTSL 511.07□□□□□ -0.645e-6■■□□□ 11.7
PRPF8Q6P2Q9 PITPNM2-205ENST00000535289 539 ntTSL 210.32□□□□□ -0.765e-7■■□□□ 11.7
PRPF8Q6P2Q9 MAMSTR-205ENST00000599703 714 ntTSL 59.2□□□□□ -0.945e-6■■□□□ 11.7
PRPF8Q6P2Q9 PITPNM2-207ENST00000542210 564 ntTSL 47.8□□□□□ -1.165e-7■■□□□ 11.7
PRPF8Q6P2Q9 DLC1-211ENST00000513883 920 ntTSL 57.27□□□□□ -1.255e-6■■□□□ 11.7
PRPF8Q6P2Q9 UBAP2L-213ENST00000466173 804 ntTSL 23.58□□□□□ -1.845e-6■■□□□ 11.7
PRPF8Q6P2Q9 RGS12-208ENST00000504559 176 ntTSL 51□□□□□ -2.255e-6■■□□□ 11.7
PRPF8Q6P2Q9 RAB17-210ENST00000477149 3211 ntTSL 1 (best)10.2□□□□□ -0.785e-9■■□□□ 11.7
PRPF8Q6P2Q9 IL4R-216ENST00000566117 529 ntTSL 520.03■□□□□ 0.83e-6■■□□□ 11.7
PRPF8Q6P2Q9 CANT1-203ENST00000586916 769 ntTSL 316.81■□□□□ 0.288e-10■■□□□ 11.7
PRPF8Q6P2Q9 CANT1-204ENST00000587242 550 ntTSL 216.81■□□□□ 0.288e-10■■□□□ 11.7
Retrieved 100 of 73,762 protein–RNA pairs in 1117.2 ms