Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ZBTB8OSP2-201ENST00000423890 504 ntBASIC9.37□□□□□ -0.91
COL15A1P39059 OR5M13P-201ENST00000433944 937 ntBASIC9.37□□□□□ -0.91
COL15A1P39059 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC9.37□□□□□ -0.91
COL15A1P39059 BMS1P11-201ENST00000442351 885 ntBASIC9.37□□□□□ -0.91
COL15A1P39059 AC007919.2-201ENST00000444110 511 ntBASIC9.37□□□□□ -0.91
COL15A1P39059 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC9.37□□□□□ -0.91
COL15A1P39059 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC9.37□□□□□ -0.91
COL15A1P39059 BMS1P9-201ENST00000457640 885 ntBASIC9.37□□□□□ -0.91
COL15A1P39059 RPS16P9-201ENST00000477220 427 ntBASIC9.37□□□□□ -0.91
COL15A1P39059 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC9.37□□□□□ -0.91
COL15A1P39059 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC9.37□□□□□ -0.91
COL15A1P39059 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC9.37□□□□□ -0.91
COL15A1P39059 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC9.37□□□□□ -0.91
COL15A1P39059 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC9.37□□□□□ -0.91
COL15A1P39059 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC9.37□□□□□ -0.91
COL15A1P39059 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC9.37□□□□□ -0.91
COL15A1P39059 AC016542.3-201ENST00000623520 619 ntBASIC9.37□□□□□ -0.91
COL15A1P39059 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC9.37□□□□□ -0.91
COL15A1P39059 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
COL15A1P39059 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
COL15A1P39059 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
COL15A1P39059 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
COL15A1P39059 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC9.37□□□□□ -0.91
COL15A1P39059 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
COL15A1P39059 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC9.37□□□□□ -0.91
COL15A1P39059 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
COL15A1P39059 XRCC6P5-201ENST00000435236 1795 ntBASIC9.37□□□□□ -0.91
COL15A1P39059 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
COL15A1P39059 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
COL15A1P39059 GPI-202ENST00000415930 4000 ntTSL 2 BASIC9.37□□□□□ -0.91
COL15A1P39059 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
COL15A1P39059 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
COL15A1P39059 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC9.37□□□□□ -0.91
COL15A1P39059 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
COL15A1P39059 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
COL15A1P39059 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
COL15A1P39059 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
COL15A1P39059 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC9.37□□□□□ -0.91
COL15A1P39059 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC9.37□□□□□ -0.91
COL15A1P39059 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
COL15A1P39059 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
COL15A1P39059 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
COL15A1P39059 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
COL15A1P39059 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
COL15A1P39059 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
COL15A1P39059 RN7SKP148-201ENST00000410179 275 ntBASIC9.37□□□□□ -0.91
COL15A1P39059 RNU2-18P-201ENST00000411224 162 ntBASIC9.37□□□□□ -0.91
COL15A1P39059 RPS14P4-201ENST00000415880 418 ntBASIC9.37□□□□□ -0.91
COL15A1P39059 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC9.37□□□□□ -0.91
COL15A1P39059 MYL6P4-201ENST00000477911 453 ntBASIC9.37□□□□□ -0.91
COL15A1P39059 RN7SL655P-201ENST00000486087 298 ntBASIC9.37□□□□□ -0.91
COL15A1P39059 SNRPCP11-201ENST00000492453 205 ntBASIC9.37□□□□□ -0.91
COL15A1P39059 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
COL15A1P39059 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
COL15A1P39059 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC9.37□□□□□ -0.91
COL15A1P39059 AC089984.3-201ENST00000552838 363 ntBASIC9.37□□□□□ -0.91
COL15A1P39059 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC9.37□□□□□ -0.91
COL15A1P39059 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC9.37□□□□□ -0.91
COL15A1P39059 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC9.37□□□□□ -0.91
COL15A1P39059 AC027271.1-201ENST00000610270 610 ntBASIC9.37□□□□□ -0.91
COL15A1P39059 AL031777.2-201ENST00000611953 196 ntBASIC9.37□□□□□ -0.91
COL15A1P39059 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
COL15A1P39059 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
COL15A1P39059 CASC19-208ENST00000641056 1292 ntBASIC9.37□□□□□ -0.91
COL15A1P39059 CASC19-227ENST00000641411 1285 ntBASIC9.37□□□□□ -0.91
COL15A1P39059 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
COL15A1P39059 OVCH1-201ENST00000318184 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
COL15A1P39059 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC9.36□□□□□ -0.91
COL15A1P39059 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
COL15A1P39059 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
COL15A1P39059 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC9.36□□□□□ -0.91
COL15A1P39059 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
COL15A1P39059 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
COL15A1P39059 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
COL15A1P39059 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC9.36□□□□□ -0.91
COL15A1P39059 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
COL15A1P39059 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
COL15A1P39059 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
COL15A1P39059 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
COL15A1P39059 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC9.36□□□□□ -0.91
COL15A1P39059 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
COL15A1P39059 TRPM3-210ENST00000377111 4618 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
COL15A1P39059 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC9.36□□□□□ -0.91
COL15A1P39059 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC9.36□□□□□ -0.91
COL15A1P39059 TRIM60-204ENST00000512596 1888 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
COL15A1P39059 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
COL15A1P39059 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
COL15A1P39059 SNORA70.5-201ENST00000365519 135 ntBASIC9.36□□□□□ -0.91
COL15A1P39059 AL022100.1-202ENST00000421214 548 ntBASIC9.36□□□□□ -0.91
COL15A1P39059 FBP2P1-202ENST00000424473 530 ntBASIC9.36□□□□□ -0.91
COL15A1P39059 AC073900.1-201ENST00000429766 776 ntBASIC9.36□□□□□ -0.91
COL15A1P39059 AL356121.1-201ENST00000442911 156 ntBASIC9.36□□□□□ -0.91
COL15A1P39059 RPL21P33-201ENST00000444831 484 ntBASIC9.36□□□□□ -0.91
COL15A1P39059 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
COL15A1P39059 RN7SL518P-201ENST00000491887 280 ntBASIC9.36□□□□□ -0.91
COL15A1P39059 HSPE1P10-201ENST00000508631 558 ntBASIC9.36□□□□□ -0.91
COL15A1P39059 IGLV1-62-201ENST00000518003 441 ntBASIC9.36□□□□□ -0.91
COL15A1P39059 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC9.36□□□□□ -0.91
COL15A1P39059 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
COL15A1P39059 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms