Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 AC018475.1-201ENST00000478358 465 ntBASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 AC008496.1-201ENST00000509131 295 ntBASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 AC018992.1-201ENST00000523778 2149 ntBASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 OR6M3P-201ENST00000531567 700 ntBASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 MYL6-211ENST00000548580 528 ntTSL 2 BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 SNORD91A-202ENST00000609620 191 ntBASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 FGL2-202ENST00000637771 989 ntBASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC6.9□□□□□ -1.3
C9orf40Q8IXQ3 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
C9orf40Q8IXQ3 EEF1A1P22-201ENST00000559385 1380 ntBASIC6.9□□□□□ -1.31
C9orf40Q8IXQ3 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
C9orf40Q8IXQ3 AC023818.2-201ENST00000623817 2304 ntBASIC6.9□□□□□ -1.31
C9orf40Q8IXQ3 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.31
C9orf40Q8IXQ3 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC6.9□□□□□ -1.31
C9orf40Q8IXQ3 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
C9orf40Q8IXQ3 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
C9orf40Q8IXQ3 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
C9orf40Q8IXQ3 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
C9orf40Q8IXQ3 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
C9orf40Q8IXQ3 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC6.9□□□□□ -1.31
C9orf40Q8IXQ3 AC098614.1-202ENST00000634895 1830 ntBASIC6.9□□□□□ -1.31
C9orf40Q8IXQ3 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
C9orf40Q8IXQ3 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.31
C9orf40Q8IXQ3 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.31
C9orf40Q8IXQ3 AC092999.1-201ENST00000624004 1924 ntBASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 RN7SKP236-201ENST00000410635 284 ntBASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 AC009413.1-201ENST00000414823 399 ntBASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 FTOP1-201ENST00000419363 861 ntBASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 PPIL1P1-201ENST00000423936 499 ntBASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 RN7SL751P-201ENST00000473281 284 ntBASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 AC008040.4-201ENST00000494834 768 ntBASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 AC068631.3-201ENST00000538831 225 ntBASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 AL356800.1-201ENST00000553339 735 ntBASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 AL049869.4-201ENST00000555669 178 ntBASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 RN7SL178P-201ENST00000582930 304 ntBASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 MIR4786-201ENST00000583954 80 ntBASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 AC012511.1-201ENST00000608140 449 ntBASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 BX005040.2-201ENST00000620504 370 ntBASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 AC106795.5-201ENST00000623288 454 ntBASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 AC099667.1-201ENST00000624222 469 ntBASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 AF131215.2-201ENST00000531549 1710 ntBASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 HSPA8P11-201ENST00000508840 1898 ntBASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
C9orf40Q8IXQ3 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 HDAC1P1-201ENST00000455482 1445 ntBASIC6.88□□□□□ -1.31
C9orf40Q8IXQ3 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms