Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AC087894.2-201ENST00000541797 462 ntTSL 4 BASIC8.06□□□□□ -1.12
UBE3AQ05086 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC8.06□□□□□ -1.12
UBE3AQ05086 AC139099.1-203ENST00000570366 607 ntTSL 3 BASIC8.06□□□□□ -1.12
UBE3AQ05086 RN7SL835P-201ENST00000579920 262 ntBASIC8.06□□□□□ -1.12
UBE3AQ05086 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC8.06□□□□□ -1.12
UBE3AQ05086 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC8.06□□□□□ -1.12
UBE3AQ05086 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC8.06□□□□□ -1.12
UBE3AQ05086 MIAT_exon1.1-201ENST00000617016 135 ntBASIC8.06□□□□□ -1.12
UBE3AQ05086 AC005355.2-201ENST00000625064 484 ntBASIC8.06□□□□□ -1.12
UBE3AQ05086 HINFP-201ENST00000350777 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
UBE3AQ05086 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
UBE3AQ05086 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
UBE3AQ05086 SLC15A1-202ENST00000376503 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
UBE3AQ05086 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
UBE3AQ05086 AC012513.3-201ENST00000623250 2116 ntBASIC8.06□□□□□ -1.12
UBE3AQ05086 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
UBE3AQ05086 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
UBE3AQ05086 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
UBE3AQ05086 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE3AQ05086 PARP1P1-201ENST00000413631 3026 ntBASIC8.05□□□□□ -1.12
UBE3AQ05086 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC8.05□□□□□ -1.12
UBE3AQ05086 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE3AQ05086 AC006058.1-201ENST00000568686 5067 ntBASIC8.05□□□□□ -1.12
UBE3AQ05086 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
UBE3AQ05086 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC8.05□□□□□ -1.12
UBE3AQ05086 AC120114.2-201ENST00000567795 2272 ntBASIC8.05□□□□□ -1.12
UBE3AQ05086 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE3AQ05086 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.05□□□□□ -1.12
UBE3AQ05086 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE3AQ05086 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
UBE3AQ05086 AC126474.2-201ENST00000623268 1750 ntBASIC8.05□□□□□ -1.12
UBE3AQ05086 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC8.05□□□□□ -1.12
UBE3AQ05086 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE3AQ05086 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE3AQ05086 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE3AQ05086 AC108099.1-201ENST00000564402 3258 ntBASIC8.05□□□□□ -1.12
UBE3AQ05086 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
UBE3AQ05086 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE3AQ05086 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE3AQ05086 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
UBE3AQ05086 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC8.05□□□□□ -1.12
UBE3AQ05086 AL390840.1-201ENST00000420303 988 ntBASIC8.05□□□□□ -1.12
UBE3AQ05086 AL604028.2-201ENST00000437848 788 ntBASIC8.05□□□□□ -1.12
UBE3AQ05086 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC8.05□□□□□ -1.12
UBE3AQ05086 RBMY2EP-202ENST00000456360 940 ntBASIC8.05□□□□□ -1.12
UBE3AQ05086 AC117394.1-201ENST00000477323 567 ntBASIC8.05□□□□□ -1.12
UBE3AQ05086 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC8.05□□□□□ -1.12
UBE3AQ05086 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
UBE3AQ05086 AC114940.1-201ENST00000512162 1265 ntBASIC8.05□□□□□ -1.12
UBE3AQ05086 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC8.05□□□□□ -1.12
UBE3AQ05086 OR5M4P-201ENST00000529436 925 ntBASIC8.05□□□□□ -1.12
UBE3AQ05086 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC8.05□□□□□ -1.12
UBE3AQ05086 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC8.05□□□□□ -1.12
UBE3AQ05086 DCN-215ENST00000550099 719 ntTSL 2 BASIC8.05□□□□□ -1.12
UBE3AQ05086 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC8.05□□□□□ -1.12
UBE3AQ05086 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC8.05□□□□□ -1.12
UBE3AQ05086 AC091932.1-201ENST00000569381 427 ntBASIC8.05□□□□□ -1.12
UBE3AQ05086 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC8.05□□□□□ -1.12
UBE3AQ05086 MRPS5P4-201ENST00000592830 325 ntBASIC8.05□□□□□ -1.12
UBE3AQ05086 AC006967.3-201ENST00000594086 1093 ntBASIC8.05□□□□□ -1.12
UBE3AQ05086 AC005479.3-201ENST00000602790 431 ntBASIC8.05□□□□□ -1.12
UBE3AQ05086 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC8.05□□□□□ -1.12
UBE3AQ05086 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC8.05□□□□□ -1.12
UBE3AQ05086 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE3AQ05086 TTTY7-201ENST00000276770 1367 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
UBE3AQ05086 TTTY7B-201ENST00000276779 1367 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
UBE3AQ05086 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC8.05□□□□□ -1.12
UBE3AQ05086 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
UBE3AQ05086 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC8.05□□□□□ -1.12
UBE3AQ05086 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
UBE3AQ05086 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
UBE3AQ05086 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE3AQ05086 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
UBE3AQ05086 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UBE3AQ05086 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC8.05□□□□□ -1.12
UBE3AQ05086 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
UBE3AQ05086 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
UBE3AQ05086 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC8.05□□□□□ -1.12
UBE3AQ05086 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
UBE3AQ05086 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
UBE3AQ05086 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC8.04□□□□□ -1.12
UBE3AQ05086 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
UBE3AQ05086 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
UBE3AQ05086 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
UBE3AQ05086 AC016831.3-201ENST00000446451 1723 ntBASIC8.04□□□□□ -1.12
UBE3AQ05086 AC078795.1-201ENST00000602342 3143 ntBASIC8.04□□□□□ -1.12
UBE3AQ05086 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC8.04□□□□□ -1.12
UBE3AQ05086 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC8.04□□□□□ -1.12
UBE3AQ05086 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
UBE3AQ05086 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
UBE3AQ05086 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
UBE3AQ05086 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC8.04□□□□□ -1.12
UBE3AQ05086 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
UBE3AQ05086 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
UBE3AQ05086 OR10D1P-201ENST00000355343 936 ntBASIC8.04□□□□□ -1.12
UBE3AQ05086 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
UBE3AQ05086 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
UBE3AQ05086 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
UBE3AQ05086 CREM-214ENST00000395887 849 ntTSL 5 BASIC8.04□□□□□ -1.12
UBE3AQ05086 OLA1P1-201ENST00000396387 1189 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms