Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 STX8-209ENST00000574431 731 ntTSL 3 BASIC9.4□□□□□ -0.9
COL15A1P39059 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC9.4□□□□□ -0.9
COL15A1P39059 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
COL15A1P39059 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
COL15A1P39059 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
COL15A1P39059 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
COL15A1P39059 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC9.4□□□□□ -0.9
COL15A1P39059 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
COL15A1P39059 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
COL15A1P39059 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
COL15A1P39059 HSPD1P1-201ENST00000503199 1726 ntBASIC9.4□□□□□ -0.91
COL15A1P39059 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
COL15A1P39059 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
COL15A1P39059 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
COL15A1P39059 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC9.4□□□□□ -0.91
COL15A1P39059 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
COL15A1P39059 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
COL15A1P39059 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
COL15A1P39059 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
COL15A1P39059 RNA5SP114-201ENST00000363780 113 ntBASIC9.39□□□□□ -0.91
COL15A1P39059 FDPSP1-201ENST00000424976 1071 ntBASIC9.39□□□□□ -0.91
COL15A1P39059 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC9.39□□□□□ -0.91
COL15A1P39059 FUNDC2P2-202ENST00000443452 493 ntBASIC9.39□□□□□ -0.91
COL15A1P39059 CYCSP44-201ENST00000448560 313 ntBASIC9.39□□□□□ -0.91
COL15A1P39059 GOT2P2-201ENST00000450663 1251 ntBASIC9.39□□□□□ -0.91
COL15A1P39059 RN7SL741P-201ENST00000482473 289 ntBASIC9.39□□□□□ -0.91
COL15A1P39059 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC9.39□□□□□ -0.91
COL15A1P39059 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC9.39□□□□□ -0.91
COL15A1P39059 AP002004.1-206ENST00000532441 876 ntBASIC9.39□□□□□ -0.91
COL15A1P39059 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC9.39□□□□□ -0.91
COL15A1P39059 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC9.39□□□□□ -0.91
COL15A1P39059 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC9.39□□□□□ -0.91
COL15A1P39059 MIR5682-201ENST00000584864 76 ntBASIC9.39□□□□□ -0.91
COL15A1P39059 AC012629.3-201ENST00000623397 328 ntBASIC9.39□□□□□ -0.91
COL15A1P39059 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
COL15A1P39059 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
COL15A1P39059 MAPK10-354ENST00000641823 2732 ntBASIC9.39□□□□□ -0.91
COL15A1P39059 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
COL15A1P39059 AL031595.3-201ENST00000624919 14262 ntBASIC9.39□□□□□ -0.91
COL15A1P39059 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
COL15A1P39059 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
COL15A1P39059 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
COL15A1P39059 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
COL15A1P39059 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
COL15A1P39059 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
COL15A1P39059 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
COL15A1P39059 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
COL15A1P39059 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
COL15A1P39059 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
COL15A1P39059 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC9.39□□□□□ -0.91
COL15A1P39059 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC9.39□□□□□ -0.91
COL15A1P39059 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
COL15A1P39059 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
COL15A1P39059 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
COL15A1P39059 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC9.38□□□□□ -0.91
COL15A1P39059 RNU12-2P-201ENST00000364789 156 ntBASIC9.38□□□□□ -0.91
COL15A1P39059 SNORA70.8-201ENST00000384231 136 ntBASIC9.38□□□□□ -0.91
COL15A1P39059 RNU1-56P-201ENST00000391303 164 ntBASIC9.38□□□□□ -0.91
COL15A1P39059 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
COL15A1P39059 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
COL15A1P39059 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC9.38□□□□□ -0.91
COL15A1P39059 AC114402.2-201ENST00000432760 643 ntBASIC9.38□□□□□ -0.91
COL15A1P39059 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC9.38□□□□□ -0.91
COL15A1P39059 IGKV1OR2-2-201ENST00000451163 355 ntBASIC9.38□□□□□ -0.91
COL15A1P39059 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC9.38□□□□□ -0.91
COL15A1P39059 SRP68P2-201ENST00000456184 254 ntBASIC9.38□□□□□ -0.91
COL15A1P39059 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
COL15A1P39059 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC9.38□□□□□ -0.91
COL15A1P39059 RPSAP48-201ENST00000466509 889 ntBASIC9.38□□□□□ -0.91
COL15A1P39059 RN7SL849P-201ENST00000485236 295 ntBASIC9.38□□□□□ -0.91
COL15A1P39059 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
COL15A1P39059 AC108120.1-201ENST00000506543 991 ntBASIC9.38□□□□□ -0.91
COL15A1P39059 SCARNA18.2-201ENST00000516882 84 ntBASIC9.38□□□□□ -0.91
COL15A1P39059 CARSP2-201ENST00000520688 277 ntBASIC9.38□□□□□ -0.91
COL15A1P39059 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC9.38□□□□□ -0.91
COL15A1P39059 RPS7P1-201ENST00000571702 585 ntBASIC9.38□□□□□ -0.91
COL15A1P39059 AC040162.2-201ENST00000573092 157 ntBASIC9.38□□□□□ -0.91
COL15A1P39059 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC9.38□□□□□ -0.91
COL15A1P39059 IGKV2OR2-7-201ENST00000604652 304 ntBASIC9.38□□□□□ -0.91
COL15A1P39059 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC9.38□□□□□ -0.91
COL15A1P39059 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC9.38□□□□□ -0.91
COL15A1P39059 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC9.38□□□□□ -0.91
COL15A1P39059 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
COL15A1P39059 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
COL15A1P39059 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
COL15A1P39059 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
COL15A1P39059 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC9.38□□□□□ -0.91
COL15A1P39059 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC9.38□□□□□ -0.91
COL15A1P39059 AC145138.1-201ENST00000512908 2851 ntBASIC9.38□□□□□ -0.91
COL15A1P39059 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
COL15A1P39059 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
COL15A1P39059 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
COL15A1P39059 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
COL15A1P39059 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
COL15A1P39059 RBFOX1-203ENST00000355637 3321 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
COL15A1P39059 BRAFP1-201ENST00000445336 2703 ntBASIC9.38□□□□□ -0.91
COL15A1P39059 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC9.38□□□□□ -0.91
COL15A1P39059 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC9.37□□□□□ -0.91
COL15A1P39059 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
COL15A1P39059 AL139806.1-201ENST00000403057 1002 ntBASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms