Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 AL080312.1-201ENST00000256654 824 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
UBE4BO95155 RNA5SP448-201ENST00000363151 111 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 AC113608.1-201ENST00000398740 305 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 CLCN3P1-201ENST00000423965 1017 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 AC009299.1-201ENST00000429684 717 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 KRTAP3-4P-201ENST00000430780 280 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 CDC42P2-201ENST00000448566 569 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 AC013429.1-201ENST00000456604 422 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 RN7SL213P-201ENST00000463482 317 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 RPL7AP56-201ENST00000476420 791 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 AC008496.1-201ENST00000509131 295 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 AC138866.1-201ENST00000514522 497 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC8.17□□□□□ -1.1
UBE4BO95155 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC8.17□□□□□ -1.1
UBE4BO95155 OR5F2P-201ENST00000532761 941 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC8.17□□□□□ -1.1
UBE4BO95155 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC8.17□□□□□ -1.1
UBE4BO95155 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC8.17□□□□□ -1.1
UBE4BO95155 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC8.17□□□□□ -1.1
UBE4BO95155 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC8.17□□□□□ -1.1
UBE4BO95155 RN7SL835P-201ENST00000579920 262 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 NDUFA3P1-201ENST00000588007 252 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC8.17□□□□□ -1.1
UBE4BO95155 AC007262.1-201ENST00000604099 321 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 AC243830.2-201ENST00000618067 630 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
UBE4BO95155 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC8.17□□□□□ -1.1
UBE4BO95155 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 AC131649.2-201ENST00000624925 4439 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 EIF3EP2-201ENST00000423042 1814 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
UBE4BO95155 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
UBE4BO95155 AC106872.6-201ENST00000514228 1346 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC8.17□□□□□ -1.1
UBE4BO95155 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.17□□□□□ -1.1
UBE4BO95155 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC8.17□□□□□ -1.1
UBE4BO95155 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC8.16□□□□□ -1.1
UBE4BO95155 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
UBE4BO95155 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
UBE4BO95155 EEF1A1P26-201ENST00000458319 1363 ntBASIC8.16□□□□□ -1.1
UBE4BO95155 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
UBE4BO95155 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
UBE4BO95155 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
UBE4BO95155 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
UBE4BO95155 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC8.16□□□□□ -1.1
UBE4BO95155 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
UBE4BO95155 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
UBE4BO95155 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
UBE4BO95155 Z99129.4-201ENST00000624649 2435 ntBASIC8.16□□□□□ -1.1
UBE4BO95155 U3.1-201ENST00000362500 215 ntBASIC8.16□□□□□ -1.1
UBE4BO95155 DPM1-201ENST00000371582 1161 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
UBE4BO95155 MIR128-2-201ENST00000384893 84 ntBASIC8.16□□□□□ -1.1
UBE4BO95155 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
UBE4BO95155 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
UBE4BO95155 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC8.16□□□□□ -1.1
UBE4BO95155 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
UBE4BO95155 GAPDHP46-201ENST00000424043 994 ntBASIC8.16□□□□□ -1.1
UBE4BO95155 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC8.16□□□□□ -1.1
UBE4BO95155 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC8.16□□□□□ -1.1
UBE4BO95155 AC084878.1-201ENST00000480555 648 ntBASIC8.16□□□□□ -1.1
UBE4BO95155 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC8.16□□□□□ -1.1
UBE4BO95155 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC8.16□□□□□ -1.1
UBE4BO95155 GAPDHP38-201ENST00000503632 1002 ntBASIC8.16□□□□□ -1.1
UBE4BO95155 PTTG3P-201ENST00000521862 606 ntBASIC8.16□□□□□ -1.1
UBE4BO95155 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC8.16□□□□□ -1.1
UBE4BO95155 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC8.16□□□□□ -1.1
UBE4BO95155 BMS1P15-201ENST00000554269 1141 ntBASIC8.16□□□□□ -1.1
UBE4BO95155 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC8.16□□□□□ -1.1
UBE4BO95155 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC8.16□□□□□ -1.1
UBE4BO95155 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
UBE4BO95155 MIR4262-201ENST00000578394 54 ntBASIC8.16□□□□□ -1.1
UBE4BO95155 MIR4258-201ENST00000580920 91 ntBASIC8.16□□□□□ -1.1
UBE4BO95155 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC8.16□□□□□ -1.1
UBE4BO95155 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
UBE4BO95155 AC022743.1-201ENST00000624990 664 ntBASIC8.16□□□□□ -1.1
UBE4BO95155 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC8.16□□□□□ -1.1
UBE4BO95155 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
UBE4BO95155 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
UBE4BO95155 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC8.16□□□□□ -1.1
UBE4BO95155 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.16□□□□□ -1.1
UBE4BO95155 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
UBE4BO95155 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
UBE4BO95155 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
UBE4BO95155 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
UBE4BO95155 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms