Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
DDX49Q9Y6V7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC24.01■■□□□ 1.43
DDX49Q9Y6V7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
DDX49Q9Y6V7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
DDX49Q9Y6V7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
DDX49Q9Y6V7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC24.01■■□□□ 1.43
DDX49Q9Y6V7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
DDX49Q9Y6V7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
DDX49Q9Y6V7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
DDX49Q9Y6V7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC24■■□□□ 1.43
DDX49Q9Y6V7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC24■■□□□ 1.43
DDX49Q9Y6V7 MIPEPP3-201ENST00000412105 444 ntBASIC24■■□□□ 1.43
DDX49Q9Y6V7 TMEM191A-211ENST00000637163 1067 ntBASIC24■■□□□ 1.43
DDX49Q9Y6V7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
DDX49Q9Y6V7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
DDX49Q9Y6V7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
DDX49Q9Y6V7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC24■■□□□ 1.43
DDX49Q9Y6V7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
DDX49Q9Y6V7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC24■■□□□ 1.43
DDX49Q9Y6V7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC24■■□□□ 1.43
DDX49Q9Y6V7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
DDX49Q9Y6V7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
DDX49Q9Y6V7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX49Q9Y6V7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
DDX49Q9Y6V7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX49Q9Y6V7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX49Q9Y6V7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.99■■□□□ 1.43
DDX49Q9Y6V7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
DDX49Q9Y6V7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
DDX49Q9Y6V7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX49Q9Y6V7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
DDX49Q9Y6V7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.99■■□□□ 1.43
DDX49Q9Y6V7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
DDX49Q9Y6V7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.98■■□□□ 1.43
DDX49Q9Y6V7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
DDX49Q9Y6V7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.98■■□□□ 1.43
DDX49Q9Y6V7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX49Q9Y6V7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
DDX49Q9Y6V7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
DDX49Q9Y6V7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
DDX49Q9Y6V7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
DDX49Q9Y6V7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX49Q9Y6V7 MKRN4P-201ENST00000444706 1521 ntBASIC23.98■■□□□ 1.43
DDX49Q9Y6V7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX49Q9Y6V7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.98■■□□□ 1.43
DDX49Q9Y6V7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
DDX49Q9Y6V7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.98■■□□□ 1.43
DDX49Q9Y6V7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
DDX49Q9Y6V7 FP700111.2-201ENST00000619190 1892 ntBASIC23.98■■□□□ 1.43
DDX49Q9Y6V7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
DDX49Q9Y6V7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
DDX49Q9Y6V7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX49Q9Y6V7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.97■■□□□ 1.43
DDX49Q9Y6V7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX49Q9Y6V7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.97■■□□□ 1.43
DDX49Q9Y6V7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
DDX49Q9Y6V7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX49Q9Y6V7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
DDX49Q9Y6V7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX49Q9Y6V7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
DDX49Q9Y6V7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC23.97■■□□□ 1.43
DDX49Q9Y6V7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
DDX49Q9Y6V7 SMG8-203ENST00000578922 2178 ntBASIC23.97■■□□□ 1.43
DDX49Q9Y6V7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC23.97■■□□□ 1.43
DDX49Q9Y6V7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
DDX49Q9Y6V7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 AC007322.4-201ENST00000509611 723 ntBASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
DDX49Q9Y6V7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.43
DDX49Q9Y6V7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
DDX49Q9Y6V7 RBM17P2-201ENST00000616397 1405 ntBASIC23.95■■□□□ 1.42
DDX49Q9Y6V7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
DDX49Q9Y6V7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX49Q9Y6V7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
DDX49Q9Y6V7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
DDX49Q9Y6V7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
DDX49Q9Y6V7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
DDX49Q9Y6V7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.95■■□□□ 1.42
DDX49Q9Y6V7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.95■■□□□ 1.42
DDX49Q9Y6V7 AC008175.2-201ENST00000612840 297 ntBASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms