Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PTCH2Q9Y6C5 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PTCH2Q9Y6C5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PTCH2Q9Y6C5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PTCH2Q9Y6C5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.79■■□□□ 1.24
PTCH2Q9Y6C5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22.79■■□□□ 1.24
PTCH2Q9Y6C5 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PTCH2Q9Y6C5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PTCH2Q9Y6C5 INGX-201ENST00000359239 846 ntBASIC22.79■■□□□ 1.24
PTCH2Q9Y6C5 FAM8A6P-201ENST00000407496 1135 ntBASIC22.79■■□□□ 1.24
PTCH2Q9Y6C5 SAPCD2P2-201ENST00000431719 1174 ntBASIC22.79■■□□□ 1.24
PTCH2Q9Y6C5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC22.79■■□□□ 1.24
PTCH2Q9Y6C5 AP005242.2-201ENST00000580065 1175 ntBASIC22.79■■□□□ 1.24
PTCH2Q9Y6C5 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC22.79■■□□□ 1.24
PTCH2Q9Y6C5 AP000550.4-202ENST00000639755 178 ntBASIC22.79■■□□□ 1.24
PTCH2Q9Y6C5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.79■■□□□ 1.24
PTCH2Q9Y6C5 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
PTCH2Q9Y6C5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PTCH2Q9Y6C5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PTCH2Q9Y6C5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
PTCH2Q9Y6C5 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
PTCH2Q9Y6C5 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PTCH2Q9Y6C5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC22.78■■□□□ 1.24
PTCH2Q9Y6C5 AC091390.4-202ENST00000476426 537 ntBASIC22.78■■□□□ 1.24
PTCH2Q9Y6C5 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
PTCH2Q9Y6C5 AL031985.4-201ENST00000642138 673 ntBASIC22.78■■□□□ 1.24
PTCH2Q9Y6C5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.78■■□□□ 1.24
PTCH2Q9Y6C5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.78■■□□□ 1.24
PTCH2Q9Y6C5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PTCH2Q9Y6C5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PTCH2Q9Y6C5 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PTCH2Q9Y6C5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.78■■□□□ 1.24
PTCH2Q9Y6C5 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
PTCH2Q9Y6C5 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.77■■□□□ 1.23
PTCH2Q9Y6C5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
PTCH2Q9Y6C5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PTCH2Q9Y6C5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PTCH2Q9Y6C5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC22.76■■□□□ 1.23
PTCH2Q9Y6C5 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
PTCH2Q9Y6C5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC22.76■■□□□ 1.23
PTCH2Q9Y6C5 FSCN1P1-201ENST00000568912 1481 ntBASIC22.76■■□□□ 1.23
PTCH2Q9Y6C5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
PTCH2Q9Y6C5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.76■■□□□ 1.23
PTCH2Q9Y6C5 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
PTCH2Q9Y6C5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PTCH2Q9Y6C5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.75■■□□□ 1.23
PTCH2Q9Y6C5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC22.75■■□□□ 1.23
PTCH2Q9Y6C5 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PTCH2Q9Y6C5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC22.75■■□□□ 1.23
PTCH2Q9Y6C5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PTCH2Q9Y6C5 AC128688.1-201ENST00000487626 519 ntBASIC22.75■■□□□ 1.23
PTCH2Q9Y6C5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PTCH2Q9Y6C5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.75■■□□□ 1.23
PTCH2Q9Y6C5 AC139887.4-201ENST00000607877 719 ntBASIC22.75■■□□□ 1.23
PTCH2Q9Y6C5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.75■■□□□ 1.23
PTCH2Q9Y6C5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
PTCH2Q9Y6C5 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PTCH2Q9Y6C5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PTCH2Q9Y6C5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PTCH2Q9Y6C5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PTCH2Q9Y6C5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PTCH2Q9Y6C5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PTCH2Q9Y6C5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.74■■□□□ 1.23
PTCH2Q9Y6C5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
PTCH2Q9Y6C5 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.74■■□□□ 1.23
PTCH2Q9Y6C5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
PTCH2Q9Y6C5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PTCH2Q9Y6C5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC22.74■■□□□ 1.23
PTCH2Q9Y6C5 AL450487.1-201ENST00000426799 995 ntBASIC22.74■■□□□ 1.23
PTCH2Q9Y6C5 DBP-204ENST00000599385 709 ntTSL 3 BASIC22.74■■□□□ 1.23
PTCH2Q9Y6C5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.74■■□□□ 1.23
PTCH2Q9Y6C5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PTCH2Q9Y6C5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PTCH2Q9Y6C5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PTCH2Q9Y6C5 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
PTCH2Q9Y6C5 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PTCH2Q9Y6C5 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.73■■□□□ 1.23
PTCH2Q9Y6C5 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms