Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 PGM5P4-201ENST00000421970 445 ntBASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGB3Q9Y5G1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGB3Q9Y5G1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PCDHGB3Q9Y5G1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGB3Q9Y5G1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGB3Q9Y5G1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGB3Q9Y5G1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGB3Q9Y5G1 AC007322.4-201ENST00000509611 723 ntBASIC19■□□□□ 0.63
PCDHGB3Q9Y5G1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGB3Q9Y5G1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHGB3Q9Y5G1 AC005181.1-201ENST00000604782 1256 ntBASIC19■□□□□ 0.63
PCDHGB3Q9Y5G1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGB3Q9Y5G1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCDHGB3Q9Y5G1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGB3Q9Y5G1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGB3Q9Y5G1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGB3Q9Y5G1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGB3Q9Y5G1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGB3Q9Y5G1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGB3Q9Y5G1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGB3Q9Y5G1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19■□□□□ 0.63
PCDHGB3Q9Y5G1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PCDHGB3Q9Y5G1 AC092720.2-201ENST00000602388 1665 ntBASIC18.99■□□□□ 0.63
PCDHGB3Q9Y5G1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB3Q9Y5G1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB3Q9Y5G1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB3Q9Y5G1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.99■□□□□ 0.63
PCDHGB3Q9Y5G1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.99■□□□□ 0.63
PCDHGB3Q9Y5G1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGB3Q9Y5G1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGB3Q9Y5G1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB3Q9Y5G1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGB3Q9Y5G1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB3Q9Y5G1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
PCDHGB3Q9Y5G1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB3Q9Y5G1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB3Q9Y5G1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGB3Q9Y5G1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDHGB3Q9Y5G1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
PCDHGB3Q9Y5G1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 AC133552.2-202ENST00000575694 574 ntBASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
PCDHGB3Q9Y5G1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB3Q9Y5G1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB3Q9Y5G1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGB3Q9Y5G1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB3Q9Y5G1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHGB3Q9Y5G1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB3Q9Y5G1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB3Q9Y5G1 CNN2P6-201ENST00000439038 900 ntBASIC18.97■□□□□ 0.63
PCDHGB3Q9Y5G1 AC083906.2-201ENST00000511578 360 ntBASIC18.97■□□□□ 0.63
PCDHGB3Q9Y5G1 AC142086.2-201ENST00000569753 217 ntBASIC18.97■□□□□ 0.63
PCDHGB3Q9Y5G1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB3Q9Y5G1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB3Q9Y5G1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHGB3Q9Y5G1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB3Q9Y5G1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB3Q9Y5G1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGB3Q9Y5G1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
PCDHGB3Q9Y5G1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms