Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC098934.4-201ENST00000564127 592 ntBASIC18.85■□□□□ 0.61
RNF6Q9Y252 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF6Q9Y252 AC053503.5-201ENST00000601508 636 ntBASIC18.85■□□□□ 0.61
RNF6Q9Y252 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.85■□□□□ 0.61
RNF6Q9Y252 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF6Q9Y252 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF6Q9Y252 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RNF6Q9Y252 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF6Q9Y252 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RNF6Q9Y252 SMG8-203ENST00000578922 2178 ntBASIC18.85■□□□□ 0.61
RNF6Q9Y252 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF6Q9Y252 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF6Q9Y252 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF6Q9Y252 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF6Q9Y252 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF6Q9Y252 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF6Q9Y252 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RNF6Q9Y252 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF6Q9Y252 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF6Q9Y252 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF6Q9Y252 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF6Q9Y252 FAM201B-201ENST00000458407 597 ntBASIC18.84■□□□□ 0.61
RNF6Q9Y252 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF6Q9Y252 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF6Q9Y252 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF6Q9Y252 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF6Q9Y252 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF6Q9Y252 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF6Q9Y252 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF6Q9Y252 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RNF6Q9Y252 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF6Q9Y252 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
RNF6Q9Y252 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.83■□□□□ 0.61
RNF6Q9Y252 AC068338.2-201ENST00000563278 1430 ntBASIC18.83■□□□□ 0.61
RNF6Q9Y252 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
RNF6Q9Y252 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF6Q9Y252 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.83■□□□□ 0.61
RNF6Q9Y252 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.83■□□□□ 0.61
RNF6Q9Y252 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF6Q9Y252 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF6Q9Y252 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
RNF6Q9Y252 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.83■□□□□ 0.61
RNF6Q9Y252 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RNF6Q9Y252 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF6Q9Y252 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
RNF6Q9Y252 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF6Q9Y252 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.83■□□□□ 0.6
RNF6Q9Y252 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF6Q9Y252 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF6Q9Y252 AC066615.1-201ENST00000640911 628 ntBASIC18.83■□□□□ 0.6
RNF6Q9Y252 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF6Q9Y252 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RNF6Q9Y252 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF6Q9Y252 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF6Q9Y252 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF6Q9Y252 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF6Q9Y252 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF6Q9Y252 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF6Q9Y252 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RNF6Q9Y252 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF6Q9Y252 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF6Q9Y252 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF6Q9Y252 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF6Q9Y252 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF6Q9Y252 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF6Q9Y252 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF6Q9Y252 CYP2T1P-201ENST00000432607 1285 ntBASIC18.82■□□□□ 0.6
RNF6Q9Y252 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF6Q9Y252 MIR4758-201ENST00000577688 71 ntBASIC18.82■□□□□ 0.6
RNF6Q9Y252 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RNF6Q9Y252 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF6Q9Y252 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF6Q9Y252 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF6Q9Y252 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
RNF6Q9Y252 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RNF6Q9Y252 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF6Q9Y252 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF6Q9Y252 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF6Q9Y252 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RNF6Q9Y252 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF6Q9Y252 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF6Q9Y252 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF6Q9Y252 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF6Q9Y252 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF6Q9Y252 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF6Q9Y252 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RNF6Q9Y252 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF6Q9Y252 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF6Q9Y252 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF6Q9Y252 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF6Q9Y252 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF6Q9Y252 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF6Q9Y252 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RNF6Q9Y252 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RNF6Q9Y252 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF6Q9Y252 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF6Q9Y252 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF6Q9Y252 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RNF6Q9Y252 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF6Q9Y252 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms