Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.95■□□□□ 0.78
SPASTQ9UBP0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.95■□□□□ 0.78
SPASTQ9UBP0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.95■□□□□ 0.78
SPASTQ9UBP0 AC005829.2-201ENST00000571422 1056 ntBASIC19.95■□□□□ 0.78
SPASTQ9UBP0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.95■□□□□ 0.78
SPASTQ9UBP0 AC233263.1-201ENST00000578059 224 ntBASIC19.95■□□□□ 0.78
SPASTQ9UBP0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.95■□□□□ 0.78
SPASTQ9UBP0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SPASTQ9UBP0 AC011484.1-201ENST00000377652 1995 ntBASIC19.95■□□□□ 0.78
SPASTQ9UBP0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SPASTQ9UBP0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPASTQ9UBP0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.94■□□□□ 0.78
SPASTQ9UBP0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPASTQ9UBP0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPASTQ9UBP0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPASTQ9UBP0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.93■□□□□ 0.78
SPASTQ9UBP0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPASTQ9UBP0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPASTQ9UBP0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.93■□□□□ 0.78
SPASTQ9UBP0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SPASTQ9UBP0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SPASTQ9UBP0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SPASTQ9UBP0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.93■□□□□ 0.78
SPASTQ9UBP0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPASTQ9UBP0 AL596275.1-201ENST00000423464 877 ntBASIC19.93■□□□□ 0.78
SPASTQ9UBP0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPASTQ9UBP0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.93■□□□□ 0.78
SPASTQ9UBP0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.93■□□□□ 0.78
SPASTQ9UBP0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.93■□□□□ 0.78
SPASTQ9UBP0 AC073130.3-201ENST00000624389 2278 ntBASIC19.93■□□□□ 0.78
SPASTQ9UBP0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SPASTQ9UBP0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPASTQ9UBP0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPASTQ9UBP0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.93■□□□□ 0.78
SPASTQ9UBP0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SPASTQ9UBP0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
SPASTQ9UBP0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPASTQ9UBP0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPASTQ9UBP0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPASTQ9UBP0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.92■□□□□ 0.78
SPASTQ9UBP0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPASTQ9UBP0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.92■□□□□ 0.78
SPASTQ9UBP0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.92■□□□□ 0.78
SPASTQ9UBP0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.92■□□□□ 0.78
SPASTQ9UBP0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.92■□□□□ 0.78
SPASTQ9UBP0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPASTQ9UBP0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.92■□□□□ 0.78
SPASTQ9UBP0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPASTQ9UBP0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPASTQ9UBP0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPASTQ9UBP0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.92■□□□□ 0.78
SPASTQ9UBP0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPASTQ9UBP0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 AC120498.8-201ENST00000614275 531 ntBASIC19.91■□□□□ 0.78
SPASTQ9UBP0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 AC006557.6-201ENST00000623071 864 ntBASIC19.91■□□□□ 0.78
SPASTQ9UBP0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPASTQ9UBP0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms