Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN7CQ9NUP9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN7CQ9NUP9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.65■□□□□ 0.26
LIN7CQ9NUP9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIN7CQ9NUP9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
LIN7CQ9NUP9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 SLC7A5P2-201ENST00000553010 536 ntBASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 BID-214ENST00000617586 542 ntTSL 5 BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.64■□□□□ 0.25
LIN7CQ9NUP9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 IKBKGP1-201ENST00000612193 1073 ntBASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LIN7CQ9NUP9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 SMG8-203ENST00000578922 2178 ntBASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 AC092437.1-201ENST00000624794 1048 ntBASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.62■□□□□ 0.25
LIN7CQ9NUP9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms