Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS45Q9NRW7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS45Q9NRW7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.71■□□□□ 0.91
VPS45Q9NRW7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.71■□□□□ 0.91
VPS45Q9NRW7 PNMA6B-201ENST00000538162 1200 ntBASIC20.71■□□□□ 0.91
VPS45Q9NRW7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
VPS45Q9NRW7 AP005212.1-201ENST00000581547 1997 ntBASIC20.71■□□□□ 0.91
VPS45Q9NRW7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
VPS45Q9NRW7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VPS45Q9NRW7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.71■□□□□ 0.91
VPS45Q9NRW7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS45Q9NRW7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.7■□□□□ 0.9
VPS45Q9NRW7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS45Q9NRW7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.7■□□□□ 0.9
VPS45Q9NRW7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS45Q9NRW7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.7■□□□□ 0.9
VPS45Q9NRW7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.7■□□□□ 0.9
VPS45Q9NRW7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.7■□□□□ 0.9
VPS45Q9NRW7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.7■□□□□ 0.9
VPS45Q9NRW7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.7■□□□□ 0.9
VPS45Q9NRW7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.7■□□□□ 0.9
VPS45Q9NRW7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS45Q9NRW7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.7■□□□□ 0.9
VPS45Q9NRW7 GABARAPL3-202ENST00000624044 1851 ntBASIC20.7■□□□□ 0.9
VPS45Q9NRW7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS45Q9NRW7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VPS45Q9NRW7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS45Q9NRW7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS45Q9NRW7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.7■□□□□ 0.9
VPS45Q9NRW7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 PGM5P4-201ENST00000421970 445 ntBASIC20.69■□□□□ 0.9
VPS45Q9NRW7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 AL589743.5-201ENST00000616611 1050 ntBASIC20.69■□□□□ 0.9
VPS45Q9NRW7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
VPS45Q9NRW7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VPS45Q9NRW7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VPS45Q9NRW7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.68■□□□□ 0.9
VPS45Q9NRW7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS45Q9NRW7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS45Q9NRW7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS45Q9NRW7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS45Q9NRW7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS45Q9NRW7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.68■□□□□ 0.9
VPS45Q9NRW7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.68■□□□□ 0.9
VPS45Q9NRW7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VPS45Q9NRW7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS45Q9NRW7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS45Q9NRW7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
VPS45Q9NRW7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
VPS45Q9NRW7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS45Q9NRW7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
VPS45Q9NRW7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS45Q9NRW7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS45Q9NRW7 AC092368.3-202ENST00000574180 1591 ntBASIC20.68■□□□□ 0.9
VPS45Q9NRW7 AC073314.1-201ENST00000568729 2216 ntBASIC20.68■□□□□ 0.9
VPS45Q9NRW7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.67■□□□□ 0.9
VPS45Q9NRW7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS45Q9NRW7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.67■□□□□ 0.9
VPS45Q9NRW7 LINC01521-201ENST00000504184 1943 ntBASIC20.67■□□□□ 0.9
VPS45Q9NRW7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VPS45Q9NRW7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS45Q9NRW7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS45Q9NRW7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.67■□□□□ 0.9
VPS45Q9NRW7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS45Q9NRW7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
VPS45Q9NRW7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
VPS45Q9NRW7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
VPS45Q9NRW7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VPS45Q9NRW7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS45Q9NRW7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS45Q9NRW7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
VPS45Q9NRW7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS45Q9NRW7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.66■□□□□ 0.9
VPS45Q9NRW7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS45Q9NRW7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS45Q9NRW7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms