Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
TLR9Q9NR96 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.38■■□□□ 1.01
TLR9Q9NR96 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.38■■□□□ 1.01
TLR9Q9NR96 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.38■■□□□ 1.01
TLR9Q9NR96 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.38■■□□□ 1.01
TLR9Q9NR96 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.38■■□□□ 1.01
TLR9Q9NR96 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TLR9Q9NR96 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TLR9Q9NR96 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TLR9Q9NR96 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TLR9Q9NR96 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TLR9Q9NR96 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.37■■□□□ 1.01
TLR9Q9NR96 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.37■■□□□ 1.01
TLR9Q9NR96 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TLR9Q9NR96 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TLR9Q9NR96 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.37■■□□□ 1.01
TLR9Q9NR96 AP000525.1-201ENST00000608286 694 ntBASIC21.37■■□□□ 1.01
TLR9Q9NR96 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.37■■□□□ 1.01
TLR9Q9NR96 AL590326.2-201ENST00000625139 305 ntBASIC21.37■■□□□ 1.01
TLR9Q9NR96 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.37■■□□□ 1.01
TLR9Q9NR96 MIR2861-201ENST00000636310 90 ntBASIC21.37■■□□□ 1.01
TLR9Q9NR96 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.37■■□□□ 1.01
TLR9Q9NR96 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TLR9Q9NR96 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.37■■□□□ 1.01
TLR9Q9NR96 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
TLR9Q9NR96 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TLR9Q9NR96 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.37■■□□□ 1.01
TLR9Q9NR96 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TLR9Q9NR96 KRT8P9-201ENST00000558927 1449 ntBASIC21.37■■□□□ 1.01
TLR9Q9NR96 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TLR9Q9NR96 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.36■■□□□ 1.01
TLR9Q9NR96 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.36■■□□□ 1.01
TLR9Q9NR96 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TLR9Q9NR96 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TLR9Q9NR96 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TLR9Q9NR96 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TLR9Q9NR96 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TLR9Q9NR96 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TLR9Q9NR96 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TLR9Q9NR96 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.36■■□□□ 1.01
TLR9Q9NR96 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.36■■□□□ 1.01
TLR9Q9NR96 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.36■■□□□ 1.01
TLR9Q9NR96 AL031963.3-201ENST00000606441 850 ntBASIC21.36■■□□□ 1.01
TLR9Q9NR96 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
TLR9Q9NR96 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TLR9Q9NR96 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.36■■□□□ 1.01
TLR9Q9NR96 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TLR9Q9NR96 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TLR9Q9NR96 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.35■■□□□ 1.01
TLR9Q9NR96 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.35■■□□□ 1.01
TLR9Q9NR96 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.35■■□□□ 1.01
TLR9Q9NR96 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.35■■□□□ 1.01
TLR9Q9NR96 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TLR9Q9NR96 MIR1238-201ENST00000408483 83 ntBASIC21.35■■□□□ 1.01
TLR9Q9NR96 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.35■■□□□ 1.01
TLR9Q9NR96 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TLR9Q9NR96 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.35■■□□□ 1.01
TLR9Q9NR96 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TLR9Q9NR96 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TLR9Q9NR96 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TLR9Q9NR96 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.35■■□□□ 1.01
TLR9Q9NR96 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.35■■□□□ 1.01
TLR9Q9NR96 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TLR9Q9NR96 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
TLR9Q9NR96 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TLR9Q9NR96 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.34■■□□□ 1.01
TLR9Q9NR96 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TLR9Q9NR96 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TLR9Q9NR96 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TLR9Q9NR96 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.34■■□□□ 1.01
TLR9Q9NR96 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
TLR9Q9NR96 AC005521.1-201ENST00000393351 872 ntBASIC21.34■■□□□ 1.01
TLR9Q9NR96 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.34■■□□□ 1.01
TLR9Q9NR96 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
TLR9Q9NR96 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TLR9Q9NR96 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TLR9Q9NR96 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TLR9Q9NR96 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.34■■□□□ 1.01
TLR9Q9NR96 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TLR9Q9NR96 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TLR9Q9NR96 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TLR9Q9NR96 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TLR9Q9NR96 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TLR9Q9NR96 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
TLR9Q9NR96 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TLR9Q9NR96 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
TLR9Q9NR96 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TLR9Q9NR96 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TLR9Q9NR96 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
TLR9Q9NR96 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.33■■□□□ 1.01
TLR9Q9NR96 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.33■■□□□ 1.01
TLR9Q9NR96 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TLR9Q9NR96 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.33■■□□□ 1.01
TLR9Q9NR96 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TLR9Q9NR96 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TLR9Q9NR96 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.33■■□□□ 1.01
TLR9Q9NR96 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TLR9Q9NR96 LINC01568-207ENST00000641790 1380 ntBASIC21.33■■□□□ 1
TLR9Q9NR96 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.33■■□□□ 1
TLR9Q9NR96 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms