Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDLIM7Q9NR12 PGM5P4-201ENST00000421970 445 ntBASIC22.59■■□□□ 1.21
PDLIM7Q9NR12 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
PDLIM7Q9NR12 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.59■■□□□ 1.21
PDLIM7Q9NR12 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.59■■□□□ 1.21
PDLIM7Q9NR12 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.59■■□□□ 1.21
PDLIM7Q9NR12 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
PDLIM7Q9NR12 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.59■■□□□ 1.21
PDLIM7Q9NR12 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDLIM7Q9NR12 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDLIM7Q9NR12 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PDLIM7Q9NR12 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDLIM7Q9NR12 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.58■■□□□ 1.21
PDLIM7Q9NR12 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDLIM7Q9NR12 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDLIM7Q9NR12 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC22.58■■□□□ 1.21
PDLIM7Q9NR12 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.58■■□□□ 1.21
PDLIM7Q9NR12 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.58■■□□□ 1.21
PDLIM7Q9NR12 AC006128.1-201ENST00000624704 1661 ntBASIC22.58■■□□□ 1.2
PDLIM7Q9NR12 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.58■■□□□ 1.2
PDLIM7Q9NR12 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.58■■□□□ 1.2
PDLIM7Q9NR12 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
PDLIM7Q9NR12 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PDLIM7Q9NR12 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDLIM7Q9NR12 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
PDLIM7Q9NR12 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDLIM7Q9NR12 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.57■■□□□ 1.2
PDLIM7Q9NR12 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.57■■□□□ 1.2
PDLIM7Q9NR12 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.57■■□□□ 1.2
PDLIM7Q9NR12 AL355355.2-201ENST00000442321 338 ntBASIC22.57■■□□□ 1.2
PDLIM7Q9NR12 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDLIM7Q9NR12 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.57■■□□□ 1.2
PDLIM7Q9NR12 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.57■■□□□ 1.2
PDLIM7Q9NR12 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDLIM7Q9NR12 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.57■■□□□ 1.2
PDLIM7Q9NR12 MIR6786-201ENST00000616843 113 ntBASIC22.57■■□□□ 1.2
PDLIM7Q9NR12 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDLIM7Q9NR12 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDLIM7Q9NR12 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDLIM7Q9NR12 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDLIM7Q9NR12 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.57■■□□□ 1.2
PDLIM7Q9NR12 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDLIM7Q9NR12 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDLIM7Q9NR12 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.56■■□□□ 1.2
PDLIM7Q9NR12 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.56■■□□□ 1.2
PDLIM7Q9NR12 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.56■■□□□ 1.2
PDLIM7Q9NR12 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PDLIM7Q9NR12 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.56■■□□□ 1.2
PDLIM7Q9NR12 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.56■■□□□ 1.2
PDLIM7Q9NR12 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC22.56■■□□□ 1.2
PDLIM7Q9NR12 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC22.56■■□□□ 1.2
PDLIM7Q9NR12 TPM1-226ENST00000560959 925 ntTSL 2 BASIC22.56■■□□□ 1.2
PDLIM7Q9NR12 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC22.56■■□□□ 1.2
PDLIM7Q9NR12 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC22.56■■□□□ 1.2
PDLIM7Q9NR12 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC22.56■■□□□ 1.2
PDLIM7Q9NR12 AC145285.6-201ENST00000604632 637 ntBASIC22.56■■□□□ 1.2
PDLIM7Q9NR12 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDLIM7Q9NR12 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDLIM7Q9NR12 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PDLIM7Q9NR12 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PDLIM7Q9NR12 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 P4HB-223ENST00000576390 439 ntTSL 4 BASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 AL121603.2-201ENST00000557373 2117 ntBASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PDLIM7Q9NR12 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 AL390719.1-204ENST00000412397 1219 ntBASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PDLIM7Q9NR12 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms