Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRCC1Q9NPI7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.39■□□□□ 0.53
KRCC1Q9NPI7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRCC1Q9NPI7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRCC1Q9NPI7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.39■□□□□ 0.53
KRCC1Q9NPI7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.39■□□□□ 0.53
KRCC1Q9NPI7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.39■□□□□ 0.53
KRCC1Q9NPI7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRCC1Q9NPI7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRCC1Q9NPI7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRCC1Q9NPI7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRCC1Q9NPI7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
KRCC1Q9NPI7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRCC1Q9NPI7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRCC1Q9NPI7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.39■□□□□ 0.53
KRCC1Q9NPI7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
KRCC1Q9NPI7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 AC004854.2-201ENST00000608450 1441 ntBASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.38■□□□□ 0.53
KRCC1Q9NPI7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRCC1Q9NPI7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRCC1Q9NPI7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.36■□□□□ 0.53
KRCC1Q9NPI7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRCC1Q9NPI7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
KRCC1Q9NPI7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRCC1Q9NPI7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRCC1Q9NPI7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRCC1Q9NPI7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
KRCC1Q9NPI7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRCC1Q9NPI7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRCC1Q9NPI7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
KRCC1Q9NPI7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRCC1Q9NPI7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
KRCC1Q9NPI7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms