Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.19■□□□□ 0.5
HMG20AQ9NP66 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMG20AQ9NP66 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
HMG20AQ9NP66 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20AQ9NP66 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20AQ9NP66 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HMG20AQ9NP66 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20AQ9NP66 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HMG20AQ9NP66 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20AQ9NP66 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.18■□□□□ 0.5
HMG20AQ9NP66 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20AQ9NP66 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20AQ9NP66 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.18■□□□□ 0.5
HMG20AQ9NP66 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20AQ9NP66 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.18■□□□□ 0.5
HMG20AQ9NP66 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.18■□□□□ 0.5
HMG20AQ9NP66 AC131212.1-201ENST00000613771 668 ntBASIC18.18■□□□□ 0.5
HMG20AQ9NP66 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
HMG20AQ9NP66 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20AQ9NP66 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HMG20AQ9NP66 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
HMG20AQ9NP66 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20AQ9NP66 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20AQ9NP66 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HMG20AQ9NP66 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.17■□□□□ 0.5
HMG20AQ9NP66 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HMG20AQ9NP66 AL138781.2-201ENST00000617896 1843 ntBASIC18.16■□□□□ 0.5
HMG20AQ9NP66 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 AC093484.2-201ENST00000580996 2166 ntBASIC18.16■□□□□ 0.5
HMG20AQ9NP66 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 UNC93B3-201ENST00000308076 687 ntBASIC18.16■□□□□ 0.5
HMG20AQ9NP66 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.16■□□□□ 0.5
HMG20AQ9NP66 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.16■□□□□ 0.5
HMG20AQ9NP66 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.15■□□□□ 0.5
HMG20AQ9NP66 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20AQ9NP66 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
HMG20AQ9NP66 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.15■□□□□ 0.5
HMG20AQ9NP66 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.15■□□□□ 0.5
HMG20AQ9NP66 AC003102.1-202ENST00000563394 1796 ntBASIC18.15■□□□□ 0.5
HMG20AQ9NP66 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.15■□□□□ 0.5
HMG20AQ9NP66 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20AQ9NP66 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
HMG20AQ9NP66 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.15■□□□□ 0.5
HMG20AQ9NP66 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20AQ9NP66 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20AQ9NP66 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20AQ9NP66 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HMG20AQ9NP66 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms