Protein–RNA interactions for Protein: Q9H8X3

LINC00574, Putative uncharacterized protein LINC00574, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00574Q9H8X3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00574Q9H8X3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00574Q9H8X3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
LINC00574Q9H8X3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00574Q9H8X3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.42■□□□□ 0.22
LINC00574Q9H8X3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.41■□□□□ 0.22
LINC00574Q9H8X3 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.41■□□□□ 0.22
LINC00574Q9H8X3 DUSP5P2-201ENST00000426873 1033 ntBASIC16.41■□□□□ 0.22
LINC00574Q9H8X3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.41■□□□□ 0.22
LINC00574Q9H8X3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.41■□□□□ 0.22
LINC00574Q9H8X3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.41■□□□□ 0.22
LINC00574Q9H8X3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.41■□□□□ 0.22
LINC00574Q9H8X3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.41■□□□□ 0.22
LINC00574Q9H8X3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.41■□□□□ 0.22
LINC00574Q9H8X3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00574Q9H8X3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00574Q9H8X3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00574Q9H8X3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.41■□□□□ 0.22
LINC00574Q9H8X3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00574Q9H8X3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00574Q9H8X3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00574Q9H8X3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 SLC25A24-204ENST00000569674 2357 ntBASIC16.4■□□□□ 0.22
LINC00574Q9H8X3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 AC142086.2-201ENST00000569753 217 ntBASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 AC005829.2-201ENST00000571422 1056 ntBASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.39■□□□□ 0.21
LINC00574Q9H8X3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00574Q9H8X3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00574Q9H8X3 AP001271.2-201ENST00000624018 1556 ntBASIC16.38■□□□□ 0.21
LINC00574Q9H8X3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.38■□□□□ 0.21
LINC00574Q9H8X3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
LINC00574Q9H8X3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LINC00574Q9H8X3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00574Q9H8X3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.38■□□□□ 0.21
LINC00574Q9H8X3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.38■□□□□ 0.21
LINC00574Q9H8X3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.38■□□□□ 0.21
LINC00574Q9H8X3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.38■□□□□ 0.21
LINC00574Q9H8X3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00574Q9H8X3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.38■□□□□ 0.21
LINC00574Q9H8X3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.38■□□□□ 0.21
LINC00574Q9H8X3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.38■□□□□ 0.21
LINC00574Q9H8X3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.38■□□□□ 0.21
LINC00574Q9H8X3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00574Q9H8X3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.38■□□□□ 0.21
LINC00574Q9H8X3 AC090192.1-201ENST00000517740 490 ntBASIC16.38■□□□□ 0.21
LINC00574Q9H8X3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
LINC00574Q9H8X3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms