Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM38AQ9H6F2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM38AQ9H6F2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TMEM38AQ9H6F2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM38AQ9H6F2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM38AQ9H6F2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM38AQ9H6F2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEM38AQ9H6F2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM38AQ9H6F2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM38AQ9H6F2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM38AQ9H6F2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM38AQ9H6F2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.67■□□□□ 0.58
TMEM38AQ9H6F2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM38AQ9H6F2 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEM38AQ9H6F2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM38AQ9H6F2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM38AQ9H6F2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM38AQ9H6F2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM38AQ9H6F2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TMEM38AQ9H6F2 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.67■□□□□ 0.58
TMEM38AQ9H6F2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 MCRIP2P1-201ENST00000394346 511 ntBASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 KRT8P17-201ENST00000453110 1448 ntBASIC18.66■□□□□ 0.58
TMEM38AQ9H6F2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM38AQ9H6F2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TMEM38AQ9H6F2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.64■□□□□ 0.58
TMEM38AQ9H6F2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
TMEM38AQ9H6F2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM38AQ9H6F2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM38AQ9H6F2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TMEM38AQ9H6F2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM38AQ9H6F2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.64■□□□□ 0.57
TMEM38AQ9H6F2 RARRES2P4-201ENST00000514074 484 ntBASIC18.64■□□□□ 0.57
TMEM38AQ9H6F2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.64■□□□□ 0.57
TMEM38AQ9H6F2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
TMEM38AQ9H6F2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM38AQ9H6F2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM38AQ9H6F2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM38AQ9H6F2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM38AQ9H6F2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM38AQ9H6F2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.64■□□□□ 0.57
TMEM38AQ9H6F2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM38AQ9H6F2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM38AQ9H6F2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM38AQ9H6F2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM38AQ9H6F2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM38AQ9H6F2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM38AQ9H6F2 AC018445.3-201ENST00000624177 1945 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms