Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.66■□□□□ 0.42
MMP28Q9H239 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP28Q9H239 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP28Q9H239 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP28Q9H239 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP28Q9H239 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP28Q9H239 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
MMP28Q9H239 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP28Q9H239 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP28Q9H239 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP28Q9H239 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP28Q9H239 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP28Q9H239 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP28Q9H239 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.65■□□□□ 0.42
MMP28Q9H239 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MMP28Q9H239 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
MMP28Q9H239 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP28Q9H239 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP28Q9H239 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP28Q9H239 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP28Q9H239 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP28Q9H239 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MMP28Q9H239 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
MMP28Q9H239 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
MMP28Q9H239 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
MMP28Q9H239 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP28Q9H239 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP28Q9H239 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP28Q9H239 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.64■□□□□ 0.41
MMP28Q9H239 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP28Q9H239 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP28Q9H239 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP28Q9H239 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.64■□□□□ 0.41
MMP28Q9H239 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.64■□□□□ 0.41
MMP28Q9H239 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.64■□□□□ 0.41
MMP28Q9H239 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MMP28Q9H239 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.64■□□□□ 0.41
MMP28Q9H239 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP28Q9H239 TSPY26P-201ENST00000476365 1326 ntBASIC17.64■□□□□ 0.41
MMP28Q9H239 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP28Q9H239 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.64■□□□□ 0.41
MMP28Q9H239 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
MMP28Q9H239 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MMP28Q9H239 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP28Q9H239 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MMP28Q9H239 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MMP28Q9H239 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP28Q9H239 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP28Q9H239 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.63■□□□□ 0.41
MMP28Q9H239 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.63■□□□□ 0.41
MMP28Q9H239 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP28Q9H239 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.63■□□□□ 0.41
MMP28Q9H239 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP28Q9H239 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP28Q9H239 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
MMP28Q9H239 AC093484.2-201ENST00000580996 2166 ntBASIC17.63■□□□□ 0.41
MMP28Q9H239 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP28Q9H239 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
MMP28Q9H239 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
MMP28Q9H239 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP28Q9H239 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP28Q9H239 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP28Q9H239 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
MMP28Q9H239 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.62■□□□□ 0.41
MMP28Q9H239 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP28Q9H239 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP28Q9H239 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP28Q9H239 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP28Q9H239 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP28Q9H239 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP28Q9H239 MIR5787-201ENST00000611784 55 ntBASIC17.62■□□□□ 0.41
MMP28Q9H239 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP28Q9H239 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP28Q9H239 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
MMP28Q9H239 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP28Q9H239 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP28Q9H239 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.62■□□□□ 0.41
MMP28Q9H239 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP28Q9H239 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP28Q9H239 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP28Q9H239 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
MMP28Q9H239 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
MMP28Q9H239 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
MMP28Q9H239 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP28Q9H239 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP28Q9H239 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.61■□□□□ 0.41
MMP28Q9H239 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP28Q9H239 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP28Q9H239 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
MMP28Q9H239 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP28Q9H239 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP28Q9H239 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP28Q9H239 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MMP28Q9H239 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.61■□□□□ 0.41
MMP28Q9H239 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.61■□□□□ 0.41
MMP28Q9H239 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP28Q9H239 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP28Q9H239 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.61■□□□□ 0.41
MMP28Q9H239 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP28Q9H239 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms