Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AMBRA1Q9C0C7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 AC091799.1-201ENST00000422823 811 ntBASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 KRT8P36-201ENST00000489121 1440 ntBASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 AC004854.2-201ENST00000608450 1441 ntBASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
AMBRA1Q9C0C7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AMBRA1Q9C0C7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
AMBRA1Q9C0C7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.72■□□□□ 0.59
AMBRA1Q9C0C7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.72■□□□□ 0.59
AMBRA1Q9C0C7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.72■□□□□ 0.59
AMBRA1Q9C0C7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
AMBRA1Q9C0C7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
AMBRA1Q9C0C7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AMBRA1Q9C0C7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AMBRA1Q9C0C7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AMBRA1Q9C0C7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AMBRA1Q9C0C7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.72■□□□□ 0.59
AMBRA1Q9C0C7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.72■□□□□ 0.59
AMBRA1Q9C0C7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AMBRA1Q9C0C7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.72■□□□□ 0.59
AMBRA1Q9C0C7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.72■□□□□ 0.59
AMBRA1Q9C0C7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.72■□□□□ 0.59
AMBRA1Q9C0C7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
AMBRA1Q9C0C7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AMBRA1Q9C0C7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
AMBRA1Q9C0C7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.72■□□□□ 0.59
AMBRA1Q9C0C7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 DPP3P2-201ENST00000416030 1696 ntBASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
AMBRA1Q9C0C7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms