Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 DUX4L16-201ENST00000555130 1264 ntBASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 AC116562.4-201ENST00000641316 2276 ntBASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
FOXP3Q9BZS1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
FOXP3Q9BZS1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXP3Q9BZS1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXP3Q9BZS1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXP3Q9BZS1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXP3Q9BZS1 ABHD17AP1-201ENST00000358206 933 ntBASIC20.66■□□□□ 0.9
FOXP3Q9BZS1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXP3Q9BZS1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXP3Q9BZS1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXP3Q9BZS1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXP3Q9BZS1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXP3Q9BZS1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXP3Q9BZS1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
FOXP3Q9BZS1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXP3Q9BZS1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXP3Q9BZS1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXP3Q9BZS1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
FOXP3Q9BZS1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.66■□□□□ 0.9
FOXP3Q9BZS1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXP3Q9BZS1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXP3Q9BZS1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 AC007322.1-201ENST00000426983 750 ntBASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 AC083906.2-201ENST00000511578 360 ntBASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 AC005181.1-201ENST00000604782 1256 ntBASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 AL121832.2-201ENST00000610979 668 ntBASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 AC243732.1-201ENST00000612648 864 ntBASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 AC231657.2-201ENST00000624556 255 ntBASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 MYCNOS-205ENST00000641950 531 ntBASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXP3Q9BZS1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.64■□□□□ 0.9
FOXP3Q9BZS1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.64■□□□□ 0.9
FOXP3Q9BZS1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
FOXP3Q9BZS1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXP3Q9BZS1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.64■□□□□ 0.9
FOXP3Q9BZS1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.64■□□□□ 0.9
FOXP3Q9BZS1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXP3Q9BZS1 BX119927.1-201ENST00000636596 1552 ntBASIC20.64■□□□□ 0.9
FOXP3Q9BZS1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
FOXP3Q9BZS1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXP3Q9BZS1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXP3Q9BZS1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
FOXP3Q9BZS1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXP3Q9BZS1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.64■□□□□ 0.89
FOXP3Q9BZS1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXP3Q9BZS1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXP3Q9BZS1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FOXP3Q9BZS1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.64■□□□□ 0.89
FOXP3Q9BZS1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.64■□□□□ 0.89
FOXP3Q9BZS1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.64■□□□□ 0.89
FOXP3Q9BZS1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FOXP3Q9BZS1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXP3Q9BZS1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXP3Q9BZS1 DPP3P2-201ENST00000416030 1696 ntBASIC20.64■□□□□ 0.89
FOXP3Q9BZS1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
FOXP3Q9BZS1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXP3Q9BZS1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXP3Q9BZS1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXP3Q9BZS1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXP3Q9BZS1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXP3Q9BZS1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.63■□□□□ 0.89
FOXP3Q9BZS1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FOXP3Q9BZS1 KRT18P20-201ENST00000548986 1279 ntBASIC20.63■□□□□ 0.89
FOXP3Q9BZS1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.63■□□□□ 0.89
FOXP3Q9BZS1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXP3Q9BZS1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms