Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM54Q9BYV2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM54Q9BYV2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM54Q9BYV2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRIM54Q9BYV2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM54Q9BYV2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM54Q9BYV2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TRIM54Q9BYV2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM54Q9BYV2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TRIM54Q9BYV2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM54Q9BYV2 AC004911.1-201ENST00000416316 871 ntBASIC19.79■□□□□ 0.76
TRIM54Q9BYV2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM54Q9BYV2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
TRIM54Q9BYV2 AC005181.1-201ENST00000604782 1256 ntBASIC19.79■□□□□ 0.76
TRIM54Q9BYV2 IKBKGP1-201ENST00000612193 1073 ntBASIC19.79■□□□□ 0.76
TRIM54Q9BYV2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM54Q9BYV2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM54Q9BYV2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM54Q9BYV2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM54Q9BYV2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TRIM54Q9BYV2 AL391422.3-201ENST00000603791 2761 ntBASIC19.79■□□□□ 0.76
TRIM54Q9BYV2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM54Q9BYV2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM54Q9BYV2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM54Q9BYV2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 AL512408.1-201ENST00000569378 2000 ntBASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 KRT18P68-201ENST00000392293 1000 ntBASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 AC092437.1-201ENST00000624794 1048 ntBASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 AL162377.1-201ENST00000618844 1793 ntBASIC19.78■□□□□ 0.76
TRIM54Q9BYV2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM54Q9BYV2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
TRIM54Q9BYV2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM54Q9BYV2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM54Q9BYV2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM54Q9BYV2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM54Q9BYV2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM54Q9BYV2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM54Q9BYV2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM54Q9BYV2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM54Q9BYV2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM54Q9BYV2 DPP3P2-201ENST00000416030 1696 ntBASIC19.77■□□□□ 0.76
TRIM54Q9BYV2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
TRIM54Q9BYV2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TRIM54Q9BYV2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.75
TRIM54Q9BYV2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.77■□□□□ 0.75
TRIM54Q9BYV2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM54Q9BYV2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM54Q9BYV2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM54Q9BYV2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM54Q9BYV2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM54Q9BYV2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
TRIM54Q9BYV2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM54Q9BYV2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM54Q9BYV2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM54Q9BYV2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM54Q9BYV2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRIM54Q9BYV2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM54Q9BYV2 AL512625.2-201ENST00000417533 625 ntBASIC19.76■□□□□ 0.75
TRIM54Q9BYV2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
TRIM54Q9BYV2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM54Q9BYV2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM54Q9BYV2 AFG3L1P-217ENST00000557444 2447 ntBASIC19.76■□□□□ 0.75
TRIM54Q9BYV2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
TRIM54Q9BYV2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM54Q9BYV2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM54Q9BYV2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM54Q9BYV2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM54Q9BYV2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM54Q9BYV2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
TRIM54Q9BYV2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM54Q9BYV2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM54Q9BYV2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM54Q9BYV2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.75■□□□□ 0.75
TRIM54Q9BYV2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM54Q9BYV2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM54Q9BYV2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM54Q9BYV2 AC073111.5-205ENST00000641717 521 ntBASIC19.75■□□□□ 0.75
TRIM54Q9BYV2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM54Q9BYV2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TRIM54Q9BYV2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM54Q9BYV2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM54Q9BYV2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM54Q9BYV2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms