Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC3Q9BY71 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.01■□□□□ 0.95
LRRC3Q9BY71 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.01■□□□□ 0.95
LRRC3Q9BY71 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.01■□□□□ 0.95
LRRC3Q9BY71 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC3Q9BY71 AP001412.1-201ENST00000608405 714 ntBASIC21.01■□□□□ 0.95
LRRC3Q9BY71 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.01■□□□□ 0.95
LRRC3Q9BY71 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC3Q9BY71 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC3Q9BY71 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LRRC3Q9BY71 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC3Q9BY71 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC3Q9BY71 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC3Q9BY71 AL121603.2-201ENST00000557373 2117 ntBASIC21.01■□□□□ 0.95
LRRC3Q9BY71 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRC3Q9BY71 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC3Q9BY71 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC3Q9BY71 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRRC3Q9BY71 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC3Q9BY71 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21■□□□□ 0.95
LRRC3Q9BY71 AC211429.1-201ENST00000415277 523 ntBASIC21■□□□□ 0.95
LRRC3Q9BY71 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21■□□□□ 0.95
LRRC3Q9BY71 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21■□□□□ 0.95
LRRC3Q9BY71 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRRC3Q9BY71 F2R-202ENST00000505600 442 ntTSL 2 BASIC21■□□□□ 0.95
LRRC3Q9BY71 BX088651.1-201ENST00000540551 451 ntBASIC21■□□□□ 0.95
LRRC3Q9BY71 MAX-217ENST00000557277 728 ntTSL 3 BASIC21■□□□□ 0.95
LRRC3Q9BY71 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC3Q9BY71 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
LRRC3Q9BY71 AL137060.1-201ENST00000618151 2648 ntBASIC21■□□□□ 0.95
LRRC3Q9BY71 KRT17P2-201ENST00000300992 1314 ntBASIC21■□□□□ 0.95
LRRC3Q9BY71 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC3Q9BY71 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRRC3Q9BY71 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC3Q9BY71 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC3Q9BY71 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21■□□□□ 0.95
LRRC3Q9BY71 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRRC3Q9BY71 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 ECEL1P3-201ENST00000427961 737 ntBASIC20.99■□□□□ 0.95
LRRC3Q9BY71 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.99■□□□□ 0.95
LRRC3Q9BY71 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRC3Q9BY71 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC3Q9BY71 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
LRRC3Q9BY71 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.97■□□□□ 0.95
LRRC3Q9BY71 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC3Q9BY71 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
LRRC3Q9BY71 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.97■□□□□ 0.95
LRRC3Q9BY71 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.97■□□□□ 0.95
LRRC3Q9BY71 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.97■□□□□ 0.95
LRRC3Q9BY71 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.97■□□□□ 0.95
LRRC3Q9BY71 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
LRRC3Q9BY71 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC3Q9BY71 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC3Q9BY71 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC3Q9BY71 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC3Q9BY71 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
LRRC3Q9BY71 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC3Q9BY71 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC3Q9BY71 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms