Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 KRT8P36-201ENST00000489121 1440 ntBASIC17.2■□□□□ 0.34
NICN1Q9BSH3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NICN1Q9BSH3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 HCG11-201ENST00000411553 5696 ntBASIC17.19■□□□□ 0.34
NICN1Q9BSH3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 AC142381.2-201ENST00000566120 298 ntBASIC17.19■□□□□ 0.34
NICN1Q9BSH3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 AC098818.2-201ENST00000564925 2320 ntBASIC17.19■□□□□ 0.34
NICN1Q9BSH3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NICN1Q9BSH3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 AC018445.3-201ENST00000624177 1945 ntBASIC17.18■□□□□ 0.34
NICN1Q9BSH3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 AC027612.3-201ENST00000413684 1047 ntBASIC17.18■□□□□ 0.34
NICN1Q9BSH3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 AC091799.1-201ENST00000422823 811 ntBASIC17.18■□□□□ 0.34
NICN1Q9BSH3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NICN1Q9BSH3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NICN1Q9BSH3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.16■□□□□ 0.34
NICN1Q9BSH3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NICN1Q9BSH3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NICN1Q9BSH3 BX119927.1-201ENST00000636596 1552 ntBASIC17.16■□□□□ 0.34
NICN1Q9BSH3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.16■□□□□ 0.34
NICN1Q9BSH3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NICN1Q9BSH3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NICN1Q9BSH3 AC007322.3-201ENST00000426526 701 ntBASIC17.16■□□□□ 0.34
NICN1Q9BSH3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.16■□□□□ 0.34
NICN1Q9BSH3 AL139246.5-201ENST00000606645 996 ntBASIC17.16■□□□□ 0.34
NICN1Q9BSH3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms