Protein–RNA interactions for Protein: Q9BRT8

CBWD1, COBW domain-containing protein 1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1Q9BRT8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CBWD1Q9BRT8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CBWD1Q9BRT8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CBWD1Q9BRT8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CBWD1Q9BRT8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.91■■□□□ 1.1
CBWD1Q9BRT8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CBWD1Q9BRT8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CBWD1Q9BRT8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CBWD1Q9BRT8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CBWD1Q9BRT8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CBWD1Q9BRT8 KRT8P17-201ENST00000453110 1448 ntBASIC21.91■■□□□ 1.1
CBWD1Q9BRT8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CBWD1Q9BRT8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.91■■□□□ 1.1
CBWD1Q9BRT8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CBWD1Q9BRT8 AC023632.3-201ENST00000521633 145 ntBASIC21.91■■□□□ 1.1
CBWD1Q9BRT8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.91■■□□□ 1.1
CBWD1Q9BRT8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.91■■□□□ 1.1
CBWD1Q9BRT8 HLA-B-256ENST00000639848 1089 ntBASIC21.91■■□□□ 1.1
CBWD1Q9BRT8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.91■■□□□ 1.1
CBWD1Q9BRT8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CBWD1Q9BRT8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CBWD1Q9BRT8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CBWD1Q9BRT8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CBWD1Q9BRT8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.91■■□□□ 1.1
CBWD1Q9BRT8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CBWD1Q9BRT8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 BX119927.1-201ENST00000636596 1552 ntBASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 PCDHAC2-203ENST00000615316 3011 ntBASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CBWD1Q9BRT8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CBWD1Q9BRT8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CBWD1Q9BRT8 KRT8P20-201ENST00000423953 1409 ntBASIC21.89■■□□□ 1.1
CBWD1Q9BRT8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.89■■□□□ 1.1
CBWD1Q9BRT8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CBWD1Q9BRT8 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.89■■□□□ 1.09
CBWD1Q9BRT8 AC060766.5-201ENST00000590539 871 ntBASIC21.89■■□□□ 1.09
CBWD1Q9BRT8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.89■■□□□ 1.09
CBWD1Q9BRT8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CBWD1Q9BRT8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CBWD1Q9BRT8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CBWD1Q9BRT8 AC092368.3-202ENST00000574180 1591 ntBASIC21.89■■□□□ 1.09
CBWD1Q9BRT8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CBWD1Q9BRT8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CBWD1Q9BRT8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.89■■□□□ 1.09
CBWD1Q9BRT8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CBWD1Q9BRT8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CBWD1Q9BRT8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CBWD1Q9BRT8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.88■■□□□ 1.09
CBWD1Q9BRT8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBWD1Q9BRT8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.88■■□□□ 1.09
CBWD1Q9BRT8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBWD1Q9BRT8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBWD1Q9BRT8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBWD1Q9BRT8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.88■■□□□ 1.09
CBWD1Q9BRT8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.88■■□□□ 1.09
CBWD1Q9BRT8 PNMA6B-201ENST00000538162 1200 ntBASIC21.88■■□□□ 1.09
CBWD1Q9BRT8 KRT18P6-201ENST00000555540 1265 ntBASIC21.88■■□□□ 1.09
CBWD1Q9BRT8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CBWD1Q9BRT8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBWD1Q9BRT8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.88■■□□□ 1.09
CBWD1Q9BRT8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBWD1Q9BRT8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.88■■□□□ 1.09
CBWD1Q9BRT8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CBWD1Q9BRT8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.87■■□□□ 1.09
CBWD1Q9BRT8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD1Q9BRT8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD1Q9BRT8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
CBWD1Q9BRT8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD1Q9BRT8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD1Q9BRT8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD1Q9BRT8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD1Q9BRT8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD1Q9BRT8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.87■■□□□ 1.09
CBWD1Q9BRT8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD1Q9BRT8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CBWD1Q9BRT8 AC005829.2-201ENST00000571422 1056 ntBASIC21.87■■□□□ 1.09
CBWD1Q9BRT8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD1Q9BRT8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD1Q9BRT8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CBWD1Q9BRT8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms