Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.95■□□□□ 0.3
FOXC2Q99958 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.95■□□□□ 0.3
FOXC2Q99958 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.95■□□□□ 0.3
FOXC2Q99958 AC010542.4-201ENST00000563151 1910 ntBASIC16.95■□□□□ 0.3
FOXC2Q99958 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXC2Q99958 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.95■□□□□ 0.3
FOXC2Q99958 KRT16P1-201ENST00000399124 1418 ntBASIC16.95■□□□□ 0.3
FOXC2Q99958 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXC2Q99958 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
FOXC2Q99958 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXC2Q99958 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXC2Q99958 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXC2Q99958 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXC2Q99958 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.94■□□□□ 0.3
FOXC2Q99958 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXC2Q99958 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.94■□□□□ 0.3
FOXC2Q99958 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXC2Q99958 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FOXC2Q99958 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
FOXC2Q99958 BX664615.1-201ENST00000443558 458 ntBASIC16.94■□□□□ 0.3
FOXC2Q99958 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.94■□□□□ 0.3
FOXC2Q99958 AC022616.7-201ENST00000525383 220 ntBASIC16.94■□□□□ 0.3
FOXC2Q99958 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.94■□□□□ 0.3
FOXC2Q99958 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.94■□□□□ 0.3
FOXC2Q99958 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FOXC2Q99958 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.94■□□□□ 0.3
FOXC2Q99958 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.94■□□□□ 0.3
FOXC2Q99958 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
FOXC2Q99958 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.94■□□□□ 0.3
FOXC2Q99958 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.94■□□□□ 0.3
FOXC2Q99958 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXC2Q99958 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.94■□□□□ 0.3
FOXC2Q99958 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FOXC2Q99958 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
FOXC2Q99958 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXC2Q99958 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXC2Q99958 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXC2Q99958 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXC2Q99958 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXC2Q99958 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FOXC2Q99958 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXC2Q99958 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXC2Q99958 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
FOXC2Q99958 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FOXC2Q99958 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXC2Q99958 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.93■□□□□ 0.3
FOXC2Q99958 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.93■□□□□ 0.3
FOXC2Q99958 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.93■□□□□ 0.3
FOXC2Q99958 AK4P3-201ENST00000418260 669 ntBASIC16.93■□□□□ 0.3
FOXC2Q99958 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.93■□□□□ 0.3
FOXC2Q99958 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.93■□□□□ 0.3
FOXC2Q99958 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
FOXC2Q99958 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FOXC2Q99958 EGLN1P1-201ENST00000531623 762 ntBASIC16.93■□□□□ 0.3
FOXC2Q99958 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
FOXC2Q99958 AL121894.2-201ENST00000602977 491 ntBASIC16.93■□□□□ 0.3
FOXC2Q99958 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.93■□□□□ 0.3
FOXC2Q99958 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXC2Q99958 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXC2Q99958 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXC2Q99958 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXC2Q99958 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
FOXC2Q99958 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXC2Q99958 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXC2Q99958 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
FOXC2Q99958 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FOXC2Q99958 AC026471.6-201ENST00000622954 1905 ntBASIC16.92■□□□□ 0.3
FOXC2Q99958 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FOXC2Q99958 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
FOXC2Q99958 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FOXC2Q99958 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXC2Q99958 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXC2Q99958 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.92■□□□□ 0.3
FOXC2Q99958 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.92■□□□□ 0.3
FOXC2Q99958 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.92■□□□□ 0.3
FOXC2Q99958 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.92■□□□□ 0.3
FOXC2Q99958 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.92■□□□□ 0.3
FOXC2Q99958 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.92■□□□□ 0.3
FOXC2Q99958 AC063952.2-201ENST00000498792 1227 ntBASIC16.92■□□□□ 0.3
FOXC2Q99958 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXC2Q99958 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.92■□□□□ 0.3
FOXC2Q99958 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.92■□□□□ 0.3
FOXC2Q99958 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FOXC2Q99958 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.92■□□□□ 0.3
FOXC2Q99958 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXC2Q99958 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.92■□□□□ 0.3
FOXC2Q99958 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXC2Q99958 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.92■□□□□ 0.3
FOXC2Q99958 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
FOXC2Q99958 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXC2Q99958 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXC2Q99958 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXC2Q99958 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
FOXC2Q99958 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXC2Q99958 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXC2Q99958 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FOXC2Q99958 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FOXC2Q99958 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXC2Q99958 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
FOXC2Q99958 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms