Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SYT6-210ENST00000641643 1587 ntBASIC13.37□□□□□ -0.27
LITAFQ99732 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LITAFQ99732 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC13.36□□□□□ -0.27
LITAFQ99732 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LITAFQ99732 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LITAFQ99732 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LITAFQ99732 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LITAFQ99732 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LITAFQ99732 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LITAFQ99732 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LITAFQ99732 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LITAFQ99732 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LITAFQ99732 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LITAFQ99732 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
LITAFQ99732 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC13.36□□□□□ -0.27
LITAFQ99732 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LITAFQ99732 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LITAFQ99732 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.36□□□□□ -0.27
LITAFQ99732 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LITAFQ99732 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LITAFQ99732 AC009237.3-201ENST00000393279 1427 ntBASIC13.36□□□□□ -0.27
LITAFQ99732 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LITAFQ99732 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.36□□□□□ -0.27
LITAFQ99732 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LITAFQ99732 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LITAFQ99732 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LITAFQ99732 AC061975.6-201ENST00000579045 1553 ntBASIC13.36□□□□□ -0.27
LITAFQ99732 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC13.36□□□□□ -0.27
LITAFQ99732 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LITAFQ99732 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LITAFQ99732 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC13.35□□□□□ -0.27
LITAFQ99732 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LITAFQ99732 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
LITAFQ99732 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LITAFQ99732 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LITAFQ99732 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LITAFQ99732 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LITAFQ99732 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LITAFQ99732 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
LITAFQ99732 KRT125P-201ENST00000546827 989 ntBASIC13.35□□□□□ -0.27
LITAFQ99732 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC13.35□□□□□ -0.27
LITAFQ99732 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
LITAFQ99732 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC13.35□□□□□ -0.27
LITAFQ99732 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LITAFQ99732 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LITAFQ99732 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LITAFQ99732 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LITAFQ99732 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.35□□□□□ -0.27
LITAFQ99732 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC13.35□□□□□ -0.27
LITAFQ99732 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.35□□□□□ -0.27
LITAFQ99732 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LITAFQ99732 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LITAFQ99732 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LITAFQ99732 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LITAFQ99732 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.35□□□□□ -0.27
LITAFQ99732 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LITAFQ99732 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LITAFQ99732 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LITAFQ99732 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LITAFQ99732 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LITAFQ99732 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LITAFQ99732 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.34□□□□□ -0.27
LITAFQ99732 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LITAFQ99732 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LITAFQ99732 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.34□□□□□ -0.27
LITAFQ99732 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LITAFQ99732 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LITAFQ99732 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LITAFQ99732 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LITAFQ99732 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LITAFQ99732 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC13.34□□□□□ -0.27
LITAFQ99732 FXN-202ENST00000396364 980 ntTSL 5 BASIC13.34□□□□□ -0.27
LITAFQ99732 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC13.34□□□□□ -0.27
LITAFQ99732 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC13.34□□□□□ -0.27
LITAFQ99732 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC13.34□□□□□ -0.27
LITAFQ99732 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC13.34□□□□□ -0.27
LITAFQ99732 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LITAFQ99732 PRTG-204ENST00000561292 833 ntTSL 3 BASIC13.34□□□□□ -0.27
LITAFQ99732 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC13.34□□□□□ -0.27
LITAFQ99732 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LITAFQ99732 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LITAFQ99732 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LITAFQ99732 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LITAFQ99732 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
LITAFQ99732 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LITAFQ99732 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
LITAFQ99732 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LITAFQ99732 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LITAFQ99732 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC13.34□□□□□ -0.27
LITAFQ99732 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LITAFQ99732 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC13.34□□□□□ -0.27
LITAFQ99732 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.34□□□□□ -0.27
LITAFQ99732 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.34□□□□□ -0.27
LITAFQ99732 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.34□□□□□ -0.27
LITAFQ99732 AC120498.9-201ENST00000339021 3867 ntBASIC13.34□□□□□ -0.27
LITAFQ99732 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LITAFQ99732 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
LITAFQ99732 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
LITAFQ99732 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC13.33□□□□□ -0.27
LITAFQ99732 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms