Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LYSTQ99698 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14□□□□□ -0.17
LYSTQ99698 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14□□□□□ -0.17
LYSTQ99698 DBP-204ENST00000599385 709 ntTSL 3 BASIC14□□□□□ -0.17
LYSTQ99698 AL671883.3-201ENST00000603274 991 ntBASIC14□□□□□ -0.17
LYSTQ99698 AL358472.4-201ENST00000633140 710 ntBASIC14□□□□□ -0.17
LYSTQ99698 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LYSTQ99698 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14□□□□□ -0.17
LYSTQ99698 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14□□□□□ -0.17
LYSTQ99698 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
LYSTQ99698 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSTQ99698 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSTQ99698 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSTQ99698 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSTQ99698 ECEL1P2-202ENST00000465689 757 ntBASIC13.99□□□□□ -0.17
LYSTQ99698 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSTQ99698 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC13.99□□□□□ -0.17
LYSTQ99698 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSTQ99698 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSTQ99698 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LYSTQ99698 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSTQ99698 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSTQ99698 AC091076.1-201ENST00000610741 619 ntBASIC13.99□□□□□ -0.17
LYSTQ99698 AC093458.2-201ENST00000623150 629 ntBASIC13.99□□□□□ -0.17
LYSTQ99698 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC13.99□□□□□ -0.17
LYSTQ99698 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.99□□□□□ -0.17
LYSTQ99698 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LYSTQ99698 AC245052.3-201ENST00000450182 901 ntBASIC13.99□□□□□ -0.17
LYSTQ99698 AL359075.1-203ENST00000462729 1002 ntBASIC13.99□□□□□ -0.17
LYSTQ99698 NAPSB-206ENST00000562112 1266 ntBASIC13.99□□□□□ -0.17
LYSTQ99698 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.99□□□□□ -0.17
LYSTQ99698 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.99□□□□□ -0.17
LYSTQ99698 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LYSTQ99698 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LYSTQ99698 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSTQ99698 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.98□□□□□ -0.17
LYSTQ99698 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSTQ99698 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LYSTQ99698 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.98□□□□□ -0.17
LYSTQ99698 KRT18P16-201ENST00000510337 1294 ntBASIC13.98□□□□□ -0.17
LYSTQ99698 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LYSTQ99698 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSTQ99698 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSTQ99698 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSTQ99698 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSTQ99698 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.98□□□□□ -0.17
LYSTQ99698 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC13.98□□□□□ -0.17
LYSTQ99698 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSTQ99698 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSTQ99698 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.98□□□□□ -0.17
LYSTQ99698 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSTQ99698 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSTQ99698 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSTQ99698 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSTQ99698 AC233723.2-201ENST00000623798 2106 ntBASIC13.98□□□□□ -0.17
LYSTQ99698 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSTQ99698 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSTQ99698 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LYSTQ99698 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSTQ99698 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LYSTQ99698 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSTQ99698 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSTQ99698 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSTQ99698 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSTQ99698 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LYSTQ99698 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LYSTQ99698 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LYSTQ99698 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSTQ99698 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LYSTQ99698 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYSTQ99698 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSTQ99698 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSTQ99698 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYSTQ99698 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSTQ99698 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYSTQ99698 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.97□□□□□ -0.17
LYSTQ99698 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSTQ99698 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSTQ99698 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.97□□□□□ -0.17
LYSTQ99698 KRT16P1-201ENST00000399124 1418 ntBASIC13.97□□□□□ -0.17
LYSTQ99698 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSTQ99698 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYSTQ99698 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSTQ99698 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
LYSTQ99698 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSTQ99698 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LYSTQ99698 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.97□□□□□ -0.17
LYSTQ99698 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSTQ99698 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LYSTQ99698 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LYSTQ99698 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSTQ99698 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LYSTQ99698 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.96□□□□□ -0.17
LYSTQ99698 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSTQ99698 AK4P3-201ENST00000418260 669 ntBASIC13.96□□□□□ -0.17
LYSTQ99698 AC116562.2-201ENST00000507042 360 ntBASIC13.96□□□□□ -0.17
LYSTQ99698 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
LYSTQ99698 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSTQ99698 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSTQ99698 GUSBP5-202ENST00000510805 1989 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms